Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0013 ATGCCTCCCCTATGCAGTACGTACGTACGTACCTACATATTCATCATTCATATATATCATGCGCGTGCAGGCCTCGCCAAGGTGGGAGAAAGAGAATGGTACTTCTTGGTGCCGCGGGACCGGAAGCACGGCAGCGGCGGCAGGCCCAACCGCACCACCCAGAAGGGATTCTGGAAAGCCACCGGTTCCGACCGCAAAATCATCAGCCTCTCCGACCCCAAGCGCCTCGTCGGCCTCAGGAAGACCTTGGTGTTCTACCGCGGCAGGGCCCCCCGCGGCTCCAAGACCGACTGGGTCATGAATGAGTACCGCCTCCCCGACTCCTCTAAGCTCTCAAAGGACATTGTGCTCTGCAAGATTTACAGAAAGGCCACCTCCTTGAAGGTCTTGGAGCAGATGGCCTCTATGGAGGAGGACATGAAGCTGCTCGCTCACGCCTCCCCTTCCAGCTCCCTCGACAAACAGGAGCTTCTTCGGCCCGAAGCTCCCGACGATGAATCATTTGATGAGGACCACAAACCCACCTTACTCCGAACCGATCACAAAGTTCCGGACCTCCAGCTTCCCCTCATTTCCAATATGGACTGGAACCAAGACCCCTTCTGGTCTCAAATTAACTCTCCCTGGCTCTCCTCTCTATCCCCCTCCCTCTTAAACTTCTAA 663 0.5611 MPPLCSTYVRTYIFIIHIYHARAGLAKVGEREWYFLVPRDRKHGSGGRPNRTTQKGFWKATGSDRKIISLSDPKRLVGLRKTLVFYRGRAPRGSKTDWVMNEYRLPDSSKLSKDIVLCKIYRKATSLKVLEQMASMEEDMKLLAHASPSSSLDKQELLRPEAPDDESFDEDHKPTLLRTDHKVPDLQLPLISNMDWNQDPFWSQINSPWLSSLSPSLLNF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0013 220 ProSiteProfiles NAC domain profile. 1 123 IPR003441 GO:0003677|GO:0006355
Lele35g0013 220 Gene3D NAC domain 14 127 IPR036093 GO:0003677|GO:0006355
Lele35g0013 220 SUPERFAMILY NAC domain 24 123 IPR036093 GO:0003677|GO:0006355
Lele35g0013 220 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 160 - -
Lele35g0013 220 MobiDBLite consensus disorder prediction 157 175 - -
Lele35g0013 220 MobiDBLite consensus disorder prediction 147 175 - -
Lele35g0013 220 Pfam No apical meristem (NAM) protein 27 105 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0013 Lele-ChrLele35 115821 116483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0013 24 215 NAC Transcription Factor Family AT2G17040 51.570 1.78e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele35g0013 NAM 1.1e-16 No_clan