Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0010 ATGGGTTGCTGCCCATCGTCATTTCTGACAACTCATCCTGAAAAGCTGCAAAATCAACAGCCCCCTCGCCATGTTCACACTCACAACCACATCCATACCCAACCACACCCGCCACCTTCTCTGACCCCCGACCCTTCCGCCGCCGGTGGGGTTCCTTCTTTCTCCGAGTTCTCTTTCTCCGACCTCAAAGCAGCCACCAATAATTTTAGCTCCGACTTTATTGTGTCTGAGAGCGGAGAGAAGGCCCCCAACCTTGTGTATAAAGGTCGCCTCCCCAATCGCCGTTGGATTGCCGTTAAGAAGTTCACCAAGGCTGCATGGCCCGATCCCAAGCAATTTGTGGATGAGGCGTCAGGTGTTGGAAAATTGCGACATCGCAGGCTTGCTAATTTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTACTTGTTGCAGAATACATGCCCTATGACACTCTCGCTAAGCATCTTTTCCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGCTCTTTCCATTGCAGAAACTTTAAATTACTGTAGTTCTGAGGGTCGCCCATTATACCATGATTTGAATGCTTATAGGGTTCTTTTTGATGAGGAAGGTGATCCACGTCTGTCATGTTTTGGTTTGATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACGAATCTTGCTTACACACCTCCTGAGTACTTAAGAAATGGAAGGGTCACTCCTGAAAGCGTCATTTACAGCTTTGGTACTGTTCTCCTAGACTTGCTAAGTGGAAAACACATCCCTCCAAGTCATGCACTTGACATGATACAGGAGAAAGCCAACATGCTTCTTATGGATTCACATTTAGAGGGAAAGTTCTCTAAAGAAGAGGCGGCAGTAGTTGTCAATCTGGCCTCTAAATGTTTGCAATATGAACCCAGGGAGCGGCCTGATACAAAGGAATTAGTCACAACACTTGCTCCATTGCAAACAAAACCGGATGTACCTTCTTACATTATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGCCCTCTTTCAGCCATGGGTGAGGCTTGTTCGAGGATGGACCTCACCGCAATACATCAGATCTTGGTTGCAACTCACTACAGAGATGACGAAGGGACTAATGAGTTGTCTTTCCAAGAGTGGACCCAACAGATGAGGGATATGTTGGAAGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGATTTCAAGACAGCAATTGAGAATTATTCACAGTTTATCGATGTGGGAACAATGGTGTCACCAACGGTTTTTGCTCGGCGCAGTCTGTGCTATCTGTTATGCGATCAACCAGATCCTGCGCTGAGAGACGCAATGCAAGCACAATGTGTTTATCCAGACTGGCCTACAGCATTCTACATGCAATCAGTTGCTCTGGCGAAGCTGGACATGCAGAAGGACGCTGCTGATATGTTGAATGAGGCTACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGCGCATAG 1527 0.4728 MGCCPSSFLTTHPEKLQNQQPPRHVHTHNHIHTQPHPPPSLTPDPSAAGGVPSFSEFSFSDLKAATNNFSSDFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVDEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPYDTLAKHLFHWENQTIEWAMRLRVALSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQEKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVTTLAPLQTKPDVPSYIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDAADMLNEATALEEKRQRGGRGA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0010 508 Pfam Protein tyrosine and serine/threonine kinase 87 323 IPR001245 GO:0004672|GO:0006468
Lele35g0010 508 SUPERFAMILY Protein kinase-like (PK-like) 52 333 IPR011009 -
Lele35g0010 508 Gene3D Phosphorylase Kinase; domain 1 47 147 - -
Lele35g0010 508 FunFam probable serine/threonine-protein kinase At4g35230 44 147 - -
Lele35g0010 508 FunFam probable serine/threonine-protein kinase At4g35230 397 506 - -
Lele35g0010 508 MobiDBLite consensus disorder prediction 1 48 - -
Lele35g0010 508 Gene3D Transferase(Phosphotransferase) domain 1 149 339 - -
Lele35g0010 508 SUPERFAMILY TPR-like 400 501 IPR011990 GO:0005515
Lele35g0010 508 ProSiteProfiles Protein kinase domain profile. 72 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0010 508 Gene3D Tetratricopeptide repeat domain 397 505 IPR011990 GO:0005515
Lele35g0010 508 Coils Coil 480 500 - -
Lele35g0010 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 36 503 IPR045845 GO:0004672|GO:0009742
Lele35g0010 508 FunFam probable serine/threonine-protein kinase At5g41260 149 340 - -
Lele35g0010 508 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0010 Lele-ChrLele35 94074 102481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0010 57 335 Glycoside Hydrolase AT3G07070 36.275 1.66e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele35g0010 PK_Tyr_Ser-Thr 1.6e-26 CL0016