Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele35g0003 ATGAGGCGGGGGGTTGATAACCAAGCATATTATGTATTGGGTCATAAGACTCCCAATATCCGTGATCTTTATACACTAGGTCGTAAATTAGGGCAGGGACAATTTGGCACTACTTATTTATGCACTGAGAATTCCACTGGCACTGAATATGCATGTAAGTCCATCTCTAAGAGGAAGTTGATCTCTAAGGAAGATGTCGAGGATGTCAGGAGGGAAATTCAGATAATGCACCATTTAGCAGGTCACAAGAATATTGTTACAATAAAGGGTGCTTATGAGGATCCATTGTATGTGCATATTGTCATGGAGCTATGTTCTGGGGGAGAGTTGTTCGATCGCATTATCCAGAGGGGCCACTACAGCGAAAGAAAGGCTGCAGAATTGACCAAAATAATTGTAGGAGTTGTTGAGGCATGTCATTCCCTTGGGGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTATTGGTCAACAAAGATGATGATTTCTCTCTTAAAGCTATTGACTTTGGGCTTTCTGTTTTCTTCAAACCAGGTCAGATTTTCGCGGACGTAGTTGGTAGTCCATATTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCAGAAGCAGATGTATGGACAGCAGGTGTCATACTGTACATATTGCTTAGTGGTGTGCCACCATTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTGTTGAAGGGACATATAGATTTTGAATCAGATCCATGGCCTCTAATATCTGGTAGTGCAAAAGATTTGATCCGGAAGATGCTATGTTCTCAACCTTCACAACGGTTAACTGCCCATGAAGTTTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGATAAAGCACTCGATCCTGCTGTCCTTTCTCGTCTCAAACAGTTCTCTGCGATGAATAAGTTAAAGAAAATGGCTTTACGGGTAATTGCTGAAAGTCTATCTGAAGAGGAGATTGCAGGTCTAAAAGAAATGTTCAAGGCCATGGATACTGATAACAGTGGTGCGATCACTTTTGATGAACTCAAGGCTGGTTTGAGAAGATATGGATCAACCCTTAAGGATACAGAAATTCGTGATCTTATGGAAGCGGCTGATGTAGACAACAGTGGAACCATAGACTATGGAGAGTTTGTTGCTGCAACAGTTCATCTAAACAAATTAGAGCGTGAGGAGCATCTAATTGCAGCCTTCCAATATTTTGACAAGGATGGAAGTGGTTATATTACAGTTGATGAGCTTCAACAAGCTTGTATAGAACATAACATGACCGATGTCTTTCTTGAAGATATTATTAGGGAAGTGGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGTTGCCATGATGCAAAAAGGCAATGCTGGAGTTGGAAGAAGGACTATGCGCAACAGTCTCAATTTGAGCATGAGAGATGCACCAGGTTGTACAGCAAAGACAGAAAGAGAAGAATAA 1485 0.4121 MRRGVDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTGTEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFADVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISGSAKDLIRKMLCSQPSQRLTAHEVLCHPWICENGVAPDKALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFVAATVHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACIEHNMTDVFLEDIIREVDQDNDGRIDYGEFVAMMQKGNAGVGRRTMRNSLNLSMRDAPGCTAKTEREE 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele35g0003 494 FunFam Calcium-dependent protein kinase 1 290 464 - -
Lele35g0003 494 Gene3D - 292 464 - -
Lele35g0003 494 FunFam Calcium-dependent protein kinase 5 110 290 - -
Lele35g0003 494 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Lele35g0003 494 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Lele35g0003 494 Pfam Protein kinase domain 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0003 494 SUPERFAMILY EF-hand 306 463 IPR011992 -
Lele35g0003 494 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Lele35g0003 494 ProSiteProfiles EF-hand calcium-binding domain profile. 436 466 IPR002048 GO:0005509
Lele35g0003 494 FunFam Calcium-dependent protein kinase 1 26 109 - -
Lele35g0003 494 CDD STKc_CAMK 24 281 - -
Lele35g0003 494 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0003 494 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 456 - -
Lele35g0003 494 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Lele35g0003 494 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele35g0003 494 ProSiteProfiles EF-hand calcium-binding domain profile. 325 360 IPR002048 GO:0005509
Lele35g0003 494 Gene3D Phosphorylase Kinase; domain 1 26 109 - -
Lele35g0003 494 Pfam EF-hand domain pair 400 461 IPR002048 GO:0005509
Lele35g0003 494 Pfam EF-hand domain pair 330 390 IPR002048 GO:0005509
Lele35g0003 494 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Lele35g0003 494 ProSitePatterns EF-hand calcium-binding domain. 338 350 IPR018247 -
Lele35g0003 494 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Lele35g0003 494 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Lele35g0003 494 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Lele35g0003 494 SMART efh_1 401 429 IPR002048 GO:0005509
Lele35g0003 494 SMART efh_1 329 357 IPR002048 GO:0005509
Lele35g0003 494 SMART efh_1 365 393 IPR002048 GO:0005509
Lele35g0003 494 SMART efh_1 435 463 IPR002048 GO:0005509
Lele35g0003 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele35g0003 Lele-ChrLele35 14216 44481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele35g0003 1 482 EF-hand Containing Proteins AT2G17290 92.531 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele35g0003 Pkinase 9.5e-73 CL0016