Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1362 ATGGGGATTTGCTGGGGTTCTTCAGCTGACAACCCGAGCACCACCAGCACATCTGATCACCTTAGTGCAGCTACAACAGGAGCATCCCGGACTACCAGCAATACTACTACTGCTACTACATCTTATGGGAGTGGAAGCATCTCCATAAATAGCCAGTTTTCCAAGTCCAGTGGTGGTGAAGCTTATCCGAATGGGCAGATTTTGCCTACTGCAAATTTAAGGATATTCACTTTTGCGGAATTGAAGGCTGCAACTAAGAATTTTAGAGTTGATACGGTACTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCAACGCCAAAAAATGGAAGTGGAACAGTCGTTGCTGTTAAAAAATTAAACTCAGAGAGCTTACAAGGATTTGAGGAATGGCAGTCGGAAATAAATTTTCTGGGACGGCTTTCTCATCCTAACCTCGTTAATCTGTTAGGATACTGTTGGGAAGAAAATGAGCTTCTTCTCGTCTATGAATTCATGCAAAAGGGCAGTTTGGAGAATCACCTATTTGGAACTAACATTCTTTCGCTTTTGCAAGGGGGTTCTGCTGTTCAACCACTTCCCTGGGACATAAGGCTTAAGATTGCTATTGGAGCAGCTCGTGGCTTGGCATTCTTGCACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCCTCCAATATATTGCTCGATGGGTCTTATACTGCAAAGATTTCAGACTTCGGCTTGGCAAAATTGGCACCTTCAGCTAGTCGGTCCCATGTAACAACAAGGGTGATGGGCACGTTTGGCTATGCGGCTCCTGAGTATGTGGCAACAGGGCATCTGTACGTGAAGAGTGACGTGTATGGATTTGGTGTTGTTTTGGTTGAGATGCTGACAGCCCTTCGGGCACTGGATCAAAACCGCCCCAGCGGCCAACATAATCTTGTGGACTGGGTGAAACCATACTTACGAGATGGAAGAAAATTGAAGAGCATAATGGACTCTCGGTTGGAGGGAAAATATCCATCCAAATCTGCATTTCGTATAGCTCAACTTGCTTTAAAATGTCTTGCATTAGAGCCTAAAAATCGGCCATCAATGAAGGAAGTTTTGGAGAACTTGGAGCGGATTCAAGCTGCCAATGACAGGCCTCTGGAGCCTAGGCACCGTTCTACACTTAACGTGGCTCACCCCCATGTTTCCCGACCTCTGCGCCCTCGATCTCACTGA 1233 0.4574 MGICWGSSADNPSTTSTSDHLSAATTGASRTTSNTTTATTSYGSGSISINSQFSKSSGGEAYPNGQILPTANLRIFTFAELKAATKNFRVDTVLGEGGFGKVFKGWLEEKATPKNGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLSHPNLVNLLGYCWEENELLLVYEFMQKGSLENHLFGTNILSLLQGGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDQNRPSGQHNLVDWVKPYLRDGRKLKSIMDSRLEGKYPSKSAFRIAQLALKCLALEPKNRPSMKEVLENLERIQAANDRPLEPRHRSTLNVAHPHVSRPLRPRSH 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1362 410 ProSitePatterns Protein kinases ATP-binding region signature. 94 125 IPR017441 GO:0005524
Lele34g1362 410 Gene3D Transferase(Phosphotransferase) domain 1 172 395 - -
Lele34g1362 410 PANTHER OS01G0588500 PROTEIN-RELATED 33 379 - -
Lele34g1362 410 MobiDBLite consensus disorder prediction 1 41 - -
Lele34g1362 410 Gene3D Phosphorylase Kinase; domain 1 72 171 - -
Lele34g1362 410 Pfam Protein tyrosine and serine/threonine kinase 90 375 IPR001245 GO:0004672|GO:0006468
Lele34g1362 410 MobiDBLite consensus disorder prediction 382 410 - -
Lele34g1362 410 CDD STKc_IRAK 94 378 - -
Lele34g1362 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Lele34g1362 410 ProSiteProfiles Protein kinase domain profile. 88 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1362 410 FunFam Serine/threonine-protein kinase BIK1 55 171 - -
Lele34g1362 410 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 172 387 - -
Lele34g1362 410 SUPERFAMILY Protein kinase-like (PK-like) 68 377 IPR011009 -
Lele34g1362 410 MobiDBLite consensus disorder prediction 7 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1362 Lele-ChrLele34 21322714 21329978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1362 71 379 Receptor kinase-like Gene Family AT4G02010 50.799 1.63e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele34g1362 PK_Tyr_Ser-Thr 1.3e-47 CL0016