Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1346 ATGAATATGGATGCAAGTAAAGCGCCTGAACTAAGTGGTGCAAGAAGGCAGAGGCATTCCATTAACCTGGCTTTAAGTCAAATGGAAAGTGAGTCAATTCGATGTAATGCTAAATATACTAGTAAGATGTGCTTGTCTTCTTGTAGTGGTGGGAGTGGTGAATTTCAGAAGCTGTCTGAGGCGCAAGGAAATGAGGACATGGAACTGCCAGGCTTCCGATTCCACCCGACCGAAGAAGAACTCCTCGATTTCTACCTCAAGAACACCCTACTCGGCAACAAGCTCCGTTTCGACATCATCGGTTTCCTCAACATTTATCACCACGATCCCTGGGACTTGCCAGGCCTCGCCAAGGTGGGAGAAAGAGAATGGTACTTCTTGGTGCCCAGGGACAGGAAGCACGGCAGCGGTGGCAGGCCCAATCGTACCACCCAGAAGGGCTTCTGGAAAGCCACTGGTTCCGACCGCAAAATCATCAGCCTCTCCGACCCCAAGCGCCTCGTCGGCCTCCGAAAGACCCTCGTCTTCTACCGCGGCAGGGCCCCCCGCGGCTCCAAGACCGACTGGGTCATGAATGAGTACCGCCTCCCCGACTCCTCCAAGTTGTCGAAGGACATTGTGCTCTGCAAGATATACAGAAAGGCCACCTCCTTGAAGGTGTTGGAGCAGAGGGCCGCCATGGAGGAGGAGATGAAGCAGCTCGCTAACCCTAACACCTCGCCTTGCAGCTCCATCGACAAGCAGGATCTTTTCCAGCCCGAAACACCCGACCATGAATCATTCGACGAAGACCACAAACCCGCCTTACTCCGAACCAATCACAAAGTTCCTGACCTCCAGTTTCCCCCCTCTTCCAATATGGACTGGAACCAAGACCCCTTCTGGTCTCAAATTAACTCTCCCTGGCTCTCCTCTCTCTCCCCCTCCCTCTTAAACTTCTAA 942 0.5308 MNMDASKAPELSGARRQRHSINLALSQMESESIRCNAKYTSKMCLSSCSGGSGEFQKLSEAQGNEDMELPGFRFHPTEEELLDFYLKNTLLGNKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFLVPRDRKHGSGGRPNRTTQKGFWKATGSDRKIISLSDPKRLVGLRKTLVFYRGRAPRGSKTDWVMNEYRLPDSSKLSKDIVLCKIYRKATSLKVLEQRAAMEEEMKQLANPNTSPCSSIDKQDLFQPETPDHESFDEDHKPALLRTNHKVPDLQFPPSSNMDWNQDPFWSQINSPWLSSLSPSLLNF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1346 313 ProSiteProfiles NAC domain profile. 68 214 IPR003441 GO:0003677|GO:0006355
Lele34g1346 313 MobiDBLite consensus disorder prediction 234 250 - -
Lele34g1346 313 SUPERFAMILY NAC domain 67 214 IPR036093 GO:0003677|GO:0006355
Lele34g1346 313 FunFam NAC domain-containing protein 67-like 77 218 - -
Lele34g1346 313 MobiDBLite consensus disorder prediction 234 264 - -
Lele34g1346 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 67 260 - -
Lele34g1346 313 Pfam No apical meristem (NAM) protein 70 196 IPR003441 GO:0003677|GO:0006355
Lele34g1346 313 Gene3D NAC domain 77 218 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1346 Lele-ChrLele34 21173445 21178617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1346 65 308 NAC Transcription Factor Family AT2G17040 56.364 1.92e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele34g1346 NAM 4.3e-33 No_clan