Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1344 ATGGCTTTCTTCCTCTGTTGTATCTTCCTTCTTGTTTCATTTGCCACTGCTTGCGATCGCTGCGCCCATCAAACTAAGGCTGCCTATTTCTCTGAAGACGCTGCTCTTTCCTCTGGGGCATGTGGGTATGGCTCCTTGGCGTTGGAACTAAGTGGTGCACACCTTGCAGCTGGTGTTCCTTCCTTGTACAAAAATGGAGCCGGTTGTGGTGCGTGCTTTCAGATAAGATGCAAGAGCTCAAGTCTGTGTAGCAAATCAGGTAGCAGAGTTGTTTTGACCGATCTCAATTCCCACAATGAAACTGATTTTGTGCTCAGTAGAAGTGCCTTCGTGGCCATGGCTCAGAAGGGTAGCGGTGAACAACTTTTGAAGCTTGGAATCTTGGATGTCGAATATAAGAGAGTTCCGTGTGAGTATAAGAACAAGAACTTGGCGGTGCGGGTGGAAGAATCAAGCAAAAAACCCTATTACTTGGCAATTAAATTTTTGTACGAAGGAGGTCAAACAGAGATAGTAGGCGTGGATGTTGCAGAGGTAGGATCATCAAAGTGGAGCTTCATGATAAGAAACCATGGAGCAGTGTGGGACACGAGCAGGGTTCCAGGAGGGGCATTGCAGATGAGGATAGTGGTGACATCAGGGTACGATGGGAAATGGATGTGGGCAAAGAAGGTGTTACCTGCTGACTGGAGAACTGGGCAAGTGTATGACACTGCTCTTCAGATCACTGACATTGCGCAAGAGGGCTGTTCTCCCTGTGATGATGCCCCCTGGTCTTGA 780 0.4808 MAFFLCCIFLLVSFATACDRCAHQTKAAYFSEDAALSSGACGYGSLALELSGAHLAAGVPSLYKNGAGCGACFQIRCKSSSLCSKSGSRVVLTDLNSHNETDFVLSRSAFVAMAQKGSGEQLLKLGILDVEYKRVPCEYKNKNLAVRVEESSKKPYYLAIKFLYEGGQTEIVGVDVAEVGSSKWSFMIRNHGAVWDTSRVPGGALQMRIVVTSGYDGKWMWAKKVLPADWRTGQVYDTALQITDIAQEGCSPCDDAPWS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1344 259 Gene3D - 13 138 IPR036908 -
Lele34g1344 259 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Lele34g1344 259 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Lele34g1344 259 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Lele34g1344 259 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Lele34g1344 259 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Lele34g1344 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 238 IPR007117 -
Lele34g1344 259 Pfam Lytic transglycolase 56 132 IPR009009 -
Lele34g1344 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Lele34g1344 259 PRINTS Major pollen allergen Lol pI signature 163 178 IPR005795 GO:0005576|GO:0019953
Lele34g1344 259 PRINTS Major pollen allergen Lol pI signature 57 68 IPR005795 GO:0005576|GO:0019953
Lele34g1344 259 PRINTS Major pollen allergen Lol pI signature 114 129 IPR005795 GO:0005576|GO:0019953
Lele34g1344 259 PRINTS Major pollen allergen Lol pI signature 214 231 IPR005795 GO:0005576|GO:0019953
Lele34g1344 259 Gene3D - 139 243 IPR036749 -
Lele34g1344 259 PANTHER EXPANSIN-B3 11 241 - -
Lele34g1344 259 SUPERFAMILY Barwin-like endoglucanases 6 141 IPR036908 -
Lele34g1344 259 SUPERFAMILY PHL pollen allergen 142 237 IPR036749 -
Lele34g1344 259 Pfam Expansin C-terminal domain 145 227 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1344 Lele-ChrLele34 21165127 21166174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1344 15 259 Expansin Gene Family AT4G38400 62.348 1.51e-106 307