Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1340 ATGGCGATGGAGGATAACGAGAGCCGAGCGAGCGGAGTGCAGGAAACATCGTCGTCTCCCGCTCAAAACCGGCAACAGAGACAGAAACTTGAAGTGTACAATGAGGTTCTTCGTCGCCTCAAGGACTCCAACAACGAAGAGGCTATGCAGCCTGGCTTCCACCATCAGCTCTGGGCCCATTTCAACCGCCTTCCAACACGGTATGCATTGGATGTGAATGTGGAAAGGGCTGCGGATGTTCTGATGCACAAGAGACTACTGCATTTGGCACATGATCCTGCTAATAGGCCTGCTATTGAAGTTCGCCTGGTCCAGGTTCAACCCATATCTGACGGAAACTTAGCTGATTCTGTCAATTCAGAAGCTCCTGATAATGAAACTGGCCAAATCTCTTCAAAGCACTCAGGGAGACAGAGTATACATCCGCCTCCTGCTTTTGGTTCTTCTCCAAACCTTGAAGCCCTGGCACTTGAAGCAACTAAGAGTGAAGATCTAGAGGTGGAACACTCTGTACATGCTGGTGAACAATATTCCCGGCCCATGCATGAAATCACCTTCTCAACGGAAGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTTCTGAGATTGGACTGAACATTCAAGAGGCACATGTTTTTTCCACAACCGATGGTTACTCGTTAGATGTGTTTGTTGTCGATGGATGGCCCTATGAGGAAACAGAACAACTTAAAGCAGTTTTGGAGAAAGAATTTTTTCTGATTGAGAGGCAGGCATGGCCCATTCAACAATCAGTATCTTCTGTTGGTGAGCCTGATCAAGGTGTGAAATGTGAACCTGATCATTTGACAATACCTAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATTTGGAAGTAAAATTGCATCTGGATCATATGGTGACCTATTTAAAGGTACATGTTGTAGTCAGGAAGTGGCGATTAAAGTTCTCAAAGCTGAGCATGTAAATTCAGATTTACAGAGGGAGTTTGCCCAGGAAGTCTACATCATGAGAAAGGTTCGGCATAAGAATGTGGTACAATTTATAGGAGCATGCACCAAGCCCCCATATTTGTGCATAGTAACAGAATTTATGTCTGGCGGAAGTGTGTATGACTACTTACATAAGCAAAAGGGGGTATTTAAATTTCCATCCCTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGGATTACTTGCACCAAAATAACATTATCCACAGAGACTTGAAGGCTGCGAATCTTTTGATGGATGAAAATTGTGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCTGATATATTTAGTTTTGGAGTTGTTCTATGGGAATTGTTAACTGGAAAGCTTCCGTACGAGAATTTGACCCCCCTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTCTTCGACCCACCATCTCCAAGAATACACATCCAAAATTTGTTGAGCTTCTCGAGAGATGTTGGCAGCAAGATCCAACACTAAGACCTGATTTCTCTGAAGTTATAGACATTCTGCAACAATTGGCTAAAGAGGTTGGAGATGGAGAGGATCCACGCAAGGAAAAATCTGGAGGGATTTTCTCTGTCCTCAGACGAGGACATCACTGA 1725 0.4388 MAMEDNESRASGVQETSSSPAQNRQQRQKLEVYNEVLRRLKDSNNEEAMQPGFHHQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQPISDGNLADSVNSEAPDNETGQISSKHSGRQSIHPPPAFGSSPNLEALALEATKSEDLEVEHSVHAGEQYSRPMHEITFSTEDKPKLLSQLTSLLSEIGLNIQEAHVFSTTDGYSLDVFVVDGWPYEETEQLKAVLEKEFFLIERQAWPIQQSVSSVGEPDQGVKCEPDHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTCCSQEVAIKVLKAEHVNSDLQREFAQEVYIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMDYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKLPYENLTPLQAAIGVVQKGLRPTISKNTHPKFVELLERCWQQDPTLRPDFSEVIDILQQLAKEVGDGEDPRKEKSGGIFSVLRRGHH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1340 574 FunFam serine/threonine-protein kinase HT1 374 564 - -
Lele34g1340 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 130 550 - -
Lele34g1340 574 Gene3D Transferase(Phosphotransferase) domain 1 374 562 - -
Lele34g1340 574 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Lele34g1340 574 SMART serkin_6 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1340 574 SUPERFAMILY Protein kinase-like (PK-like) 283 544 IPR011009 -
Lele34g1340 574 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Lele34g1340 574 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Lele34g1340 574 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Lele34g1340 574 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Lele34g1340 574 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Lele34g1340 574 MobiDBLite consensus disorder prediction 552 574 - -
Lele34g1340 574 MobiDBLite consensus disorder prediction 113 145 - -
Lele34g1340 574 ProSiteProfiles Protein kinase domain profile. 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1340 574 Pfam Protein tyrosine and serine/threonine kinase 295 543 IPR001245 GO:0004672|GO:0006468
Lele34g1340 574 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Lele34g1340 574 MobiDBLite consensus disorder prediction 552 567 - -
Lele34g1340 574 Coils Coil 23 43 - -
Lele34g1340 574 MobiDBLite consensus disorder prediction 1 29 - -
Lele34g1340 574 CDD STKc_MAP3K-like 301 544 - -
Lele34g1340 574 ProSiteProfiles ACT domain profile. 183 266 IPR002912 -
Lele34g1340 574 MobiDBLite consensus disorder prediction 113 149 - -
Lele34g1340 574 SUPERFAMILY ACT-like 181 245 IPR045865 -
Lele34g1340 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Lele34g1340 574 MobiDBLite consensus disorder prediction 9 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1340 Lele-ChrLele34 21126301 21138215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1340 8 573 MAP Kinase Kinase Kinase AT4G35780 65.548 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele34g1340 PK_Tyr_Ser-Thr 1.2e-72 CL0016