Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1339 ATGCTCATTGGTAAGTTCTTGCACAAACAGAAAGCTTCTGGGGACATGTCGCTGGATATGGATTTAGAAATGGATGAGTTCCAGCATGACTACAAATTGCCTCCGGTGGAAGAGTCTCCGCAGCTCAACCGCATTTCCAAGGACCTCAAAGTCTCGTTCGAGGAACCCACTTCCAATGTTGTTGAGGCGGCAACTGATACCGTTAGACGAAGGTACAAGGACTCGCCGGTTCAAACCGAAGTTCATAAATCGCCGCAACGCGATCAATATGGATCGCCGCCTGTCGCTCAGAGCGGTAATGCTGCTGCTGGAGATGGCGAGGTGATAAGATGTACCTCCAACACCTCTTATGAAAGGAATCTTCCGTTGCAGAGGAAATCTGCTCTGCTGAAGGCCAGAAATAAGTCAAGATTGTTGGACCCGCCGGACGAGCCGGACAGAAGTTTGATTTTGTTTGTTGCTACGTTAGCATGCACGCTGAGTAACCCATTTTTGAGGAATAAGATTCTCTGGAAGCTCCAGTTATGGAAATGGGAGAAGGTTGAGAGGGCGACTAGAGGCAACAACGCCCTTCAATATGTCACCAAGGTCTTGGTCTGTTTCTTGGTGGGTACTTTGGTATGGTTGGCAAAAACTCTCGTGGTTAAGGTTTTGGCTTCTTCCTTCTATACAACCACATACTTTGATAGGATTCAGGAGTCACTGTTTAATCAATATGTGATTGAAACACTGTCGGGGCCACGCCTGATCGAAATTCAGAAGTCAGAGGAAGAGGAACAAAAACTTGCTGATGAGGTTCAGAAACTGCAGAATGCGGGGTTGACATTCCCCCTGAGCTTAGGGCAACTAAAGTTTTCTCGTCCACTCTCCCATAAGTCAGATGATGGGATTACTATTGATCACCTGCATAAGCTGAATCCAAAAAATGTCTCTGCCAGGAATATGAAAAGGTTAATGAATATGGTCCGGCCCGGCACTCTTTCTACACTGGATGAGCAGATACTGGATTCAGCTCAAGATGCTGAAAATGGCACACAGATTAGAAGTGAAAATGAGGCAAAAGCTGCGGCAAAGAAAATATTTCAGAATGTTGCCAGGCGGGGTAGCAGGTTCATTTACCTGGAGGATTTGATGCGTTTTATGCGGGAAGATGAAGCTGAAAAAACCATGGATCTCTTCGAAGGAGCATCTGATTCTGGGAATATCAGCAAATCTGCCTTGAAGAACTGGGTGGTAAGAATCTTAGCAACACCTGGAGCTTGA 1263 0.4616 MLIGKFLHKQKASGDMSLDMDLEMDEFQHDYKLPPVEESPQLNRISKDLKVSFEEPTSNVVEAATDTVRRRYKDSPVQTEVHKSPQRDQYGSPPVAQSGNAAAGDGEVIRCTSNTSYERNLPLQRKSALLKARNKSRLLDPPDEPDRSLILFVATLACTLSNPFLRNKILWKLQLWKWEKVERATRGNNALQYVTKVLVCFLVGTLVWLAKTLVVKVLASSFYTTTYFDRIQESLFNQYVIETLSGPRLIEIQKSEEEEQKLADEVQKLQNAGLTFPLSLGQLKFSRPLSHKSDDGITIDHLHKLNPKNVSARNMKRLMNMVRPGTLSTLDEQILDSAQDAENGTQIRSENEAKAAAKKIFQNVARRGSRFIYLEDLMRFMREDEAEKTMDLFEGASDSGNISKSALKNWVVRILATPGA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1339 420 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 180 414 IPR016688 -
Lele34g1339 420 Coils Coil 252 272 - -
Lele34g1339 420 MobiDBLite consensus disorder prediction 82 96 - -
Lele34g1339 420 MobiDBLite consensus disorder prediction 72 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1339 Lele-ChrLele34 21119397 21121535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1339 179 418 Mechanosensitive Ion Channel Family AT2G17010 58.268 1.47e-87 278