Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1324 ATGAACTTTCTGAGGTCCTGCTTTCGGCCAGGTTCGGATAGATATGCACGAACAGGTTTAGATGGGGGAGGTAAACAAGATGGGCTCTTATGGTACAAGGACTCGGGGCAGCATTTAAACGGTGAATTTTCAATGGCTGTGGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGCTTGAATCTGGCAGTTTGAGCTCCCATGAATCTGGCCCTTATGGAACATTTATCGGTGTCTATGACGGCCATGGAGGGCCGGAGACATCCCGGTTTATCAACAATCACCTCTTTCACCTTCTCAAGAGGTTTACTGCAGAGCAACAATCAATGTCCGTTGATGTAATCCGTAAGGCATTTCAAGCAACAGAGGAAGGATTTATGTCACTTGTTGCCAAACAGTGGCTAATGAAACCACAAATCGCAGCAGTTGGGTCTTGCTGTCTTGTTGGTGTTATTTGTAACGGTAGCATTTATGTAGCAAATCTTGGCGATTCCCGTGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGAGAGGTTCTAGCCATGCAATTGTCTTCGGAGCACAATGCAGCTTTAGAGTCTGTTAGACAGGAGCTGCGCTCCTTGCATCCTGATGATTCACAGATTGTTGTTTTAAAGCATAATGTATGGCGAGTGAAGGGCCTAATACAAGTTTCTAGATCCATTGGGGATGTATATTTGAAGAAGGCTGAGTTCAATAGAGAACCTCTATATGCTAAATTTCGTCTTCGCGAGCCTTTCAAGAGGCCAATACTGAGCTCAGACCCATCCATATCAGTGTTTCAGTTGCAGCCACATGATCGGTTTGTTATATTTGCATCTGATGGACTCTGGGAGCATCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAATCCCCGCAGTGCAAGCGCAAGGAGGCTGGTGAAAGCTGCCCTTCAAGAAGCGGCAAAGAAGAGAGAAATGAGATATTCAGACCTAAAGAAAATTGACCGTGGGGTTCGACGACATTTCCATGATGACATTACTGTGATCGTGGTATTTCTTGACTCAAATCTGGTTAGTAGAGCAAGCTCTGCCAAATTCAACAATATATCAGTCAGAGGGGGTGGAAGAACCCTTCCTCATAACACACTGGCACCATGTGCACCGACAGATGGCGGTGGTAACTGA 1176 0.4549 MNFLRSCFRPGSDRYARTGLDGGGKQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQLESGSLSSHESGPYGTFIGVYDGHGGPETSRFINNHLFHLLKRFTAEQQSMSVDVIRKAFQATEEGFMSLVAKQWLMKPQIAAVGSCCLVGVICNGSIYVANLGDSRAVLGRVVKATGEVLAMQLSSEHNAALESVRQELRSLHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSDPSISVFQLQPHDRFVIFASDGLWEHLSNQEAVDIVQNNPRSASARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSAKFNNISVRGGGRTLPHNTLAPCAPTDGGGN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1324 391 CDD PP2Cc 43 350 IPR001932 -
Lele34g1324 391 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Lele34g1324 391 SUPERFAMILY PP2C-like 55 351 IPR036457 -
Lele34g1324 391 SMART PP2C_4 34 348 IPR001932 -
Lele34g1324 391 Gene3D - 31 361 IPR036457 -
Lele34g1324 391 ProSiteProfiles PPM-type phosphatase domain profile. 42 350 IPR001932 -
Lele34g1324 391 Pfam Protein phosphatase 2C 71 318 IPR001932 -
Lele34g1324 391 PANTHER PROTEIN PHOSPHATASE 40 348 - -
Lele34g1324 391 FunFam Phosphatase 2C family protein 31 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1324 Lele-ChrLele34 21012813 21015931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1324 1 390 PP2C-type Phosphatase Gene Family AT4G38520 73.913 0.0 620