Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1301 ATGGTTGGTTCTTCTGAAGAAGAGGGTGACAAAGCAATGCGGAAAGATATGTCCTTTCTTGCTCAACCGCGATGCCTCCTTTTATTCCTTGTTCTTTCAGTTCTTCTGATTTTCGCCTTCTCTGTCTCTAAGCGGGTTGAGGAGAAACCAGAAGAGGAGCCTGAAATTACACACAGAGTATTCTTGGATGTTGATATTGATGACCAACGATTAGGTAGGATCATTATTGGATTATATGGGCAAGTTGTACCAAAAACTGCAGAGAATTTCAGAGTTTTGTGCACAGGGGAGAAAGGCAAGAGTTCCAATGGAATAAAGCTTCATTATAAAGGAACACCATTTCATCGCGTAATATCTGGTTTCGTGATTCAGGGTGGAGACATCGTTCATAAAGATGGCAGTGGATATGAATCTATTTACGGCGGCACCTTTCCTGATGAGAATTTCAAGATAAAACATTCACATGCTGGGGTTGTCTCTATGGTGAATTCTGGACCGGATTCCAATGGCTCGCAGTTTTTTATCACCACCGTGAAGGCTAGCTGGTTGGATGGAGAGCACGTTGTATTTGGGAAGGTGATAGAAGGTATGGATACCGTGTTTGCCATAGAAGGGGGAGCCGGAACCTACAGCGGTAAACCGAGAAAGAAATTAGTAATATCTGACTCTGGAGAGATACCACGGAGCCAGTGGGAGGAGGAAGGGTGA 708 0.4407 MVGSSEEEGDKAMRKDMSFLAQPRCLLLFLVLSVLLIFAFSVSKRVEEKPEEEPEITHRVFLDVDIDDQRLGRIIIGLYGQVVPKTAENFRVLCTGEKGKSSNGIKLHYKGTPFHRVISGFVIQGGDIVHKDGSGYESIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIEGMDTVFAIEGGAGTYSGKPRKKLVISDSGEIPRSQWEEEG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1301 235 Gene3D - 45 232 IPR029000 -
Lele34g1301 235 SUPERFAMILY Cyclophilin-like 55 226 IPR029000 -
Lele34g1301 235 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 109 126 IPR020892 GO:0003755|GO:0006457
Lele34g1301 235 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 226 - -
Lele34g1301 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Lele34g1301 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 93 IPR002130 GO:0000413|GO:0003755
Lele34g1301 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Lele34g1301 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 185 200 IPR002130 GO:0000413|GO:0003755
Lele34g1301 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Lele34g1301 235 FunFam Peptidyl-prolyl cis-trans isomerase 46 232 - -
Lele34g1301 235 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 61 225 IPR002130 GO:0000413|GO:0003755
Lele34g1301 235 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 222 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1301 Lele-ChrLele34 20876434 20879740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1301 72 220 U-box Gene Family AT5G67530 43.333 7.18e-27 106