Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1288 ATGCCCCCTCTAACCGTGGTCAATTCGAAACTTAACTACGGTTACTATACATCCGCTACAATTTTGCCACGTGTTTCAATCCAACGGTCACTTCCTAAGATATCAGACCCAGAGGCAGGAAAAATGGCAAACCCGAAGGTCTACTTCGACATAACCATCGGTGGCCAGCCCGCCGGTCGCGTAGTCATAGAGCTCTTTGCGGATACCACCCCAAAGACCGCCGAGAACTTCCGTGCCCTCTGCACCGGAGAGAAGGGAGTTGGCCGCAGCGGAAAGCCCCTTCACTACAAGGGCTCCATCTTCCACCGTGTGATCCCCGACTTCATGTGCCAGGGCGGCGACTTCACCGCCGGGAACGGCACCGGCGGCGAGTCGATTTACGGCAGCAAGTTCGAGGACGAGAACTTTGTGAGGAAGCACACCGGCCCCGGAGTGCTTTCCATGGCCAATGCCGGGCCCGGTACCAACGGGTCGCAGTTCTTCATCTGCACGGCCCAAACGTCGTGGCTGGACGGGAAGCACGTGGTATTCGGTCAGGTGGTGGAAGGCATGGATGTGGTGAGGGAGGTGGAGAAGGTCGGGTCAAGGTCTGGGAAAACGTCGAAGCCAGTGGAGATTGCCGACTGCGGTCAACTGTCTTAG 642 0.5763 MPPLTVVNSKLNYGYYTSATILPRVSIQRSLPKISDPEAGKMANPKVYFDITIGGQPAGRVVIELFADTTPKTAENFRALCTGEKGVGRSGKPLHYKGSIFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFEDENFVRKHTGPGVLSMANAGPGTNGSQFFICTAQTSWLDGKHVVFGQVVEGMDVVREVEKVGSRSGKTSKPVEIADCGQLS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1288 213 SUPERFAMILY Cyclophilin-like 39 212 IPR029000 -
Lele34g1288 213 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 96 113 IPR020892 GO:0003755|GO:0006457
Lele34g1288 213 CDD cyclophilin_ABH_like 45 210 - -
Lele34g1288 213 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 48 211 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 Gene3D - 34 213 IPR029000 -
Lele34g1288 213 FunFam Peptidyl-prolyl cis-trans isomerase 41 213 - -
Lele34g1288 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 159 171 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 113 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 187 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 80 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 48 210 IPR002130 GO:0000413|GO:0003755
Lele34g1288 213 PIRSF Peptidylpro_ismrse 34 213 IPR024936 GO:0003755
Lele34g1288 213 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 46 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1288 Lele-ChrLele34 20801910 20802633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1288 59 193 U-box Gene Family AT5G67530 48.529 2.02e-29 112