Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1286 ATGATGTTGACGACGCCAATATTGGTTGAAACCATGGATTGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAACTGAGGAGGGACCGGCTCAATGAACAGTTCGTAGAATTGGGTAGCATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTCGCTGATACAATCCAATTGCTGAAGGACCTTACTTCGCAAGTTAGTAAACTCAAAGACGAATATGCTATGCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAACGATCTTAGGGAAGAGAAGGCTTCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAGCAACGACTCAGGACTATGTTCCCTTGGGGTGCAATGGATCACTCAGTTATGATGGCTCCACCTTCATATCCCTATCCAGTGCCAGTGCCAGTGGCAGTCCCTCCTGGTCCAATTCCCATGCATCCACCTATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCCGTGTTCAACATTCGTTCCTTATCTAGCCCCTAATACTCTTGTTGAACATCAGTCCACACAATATTTTACCCCCCCATTTCCTCCCGGTGGCCATTCCCATGCATCAGGAACACAAGATTCCAGAAGCAAATCGTCCACGGAGAGCAAGGTTGAAAATGATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTACGACAGACCAGGAGATGTCATCTGGGCAAAGAAAATCCAGCAGGTTGTCCACGAACACAGACGGGAGTTCATCCGGTTGGTGTTCTTCCTCTCACAGCGTACAGGATATCTCATCAAGTAGCGTAGTTGGCAGCAGAAAAGCTAATGAATGA 888 0.4572 MMLTTPILVETMDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILADTIQLLKDLTSQVSKLKDEYAMLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTMFPWGAMDHSVMMAPPSYPYPVPVPVAVPPGPIPMHPPMQPYPFFANQNPGVIPNPCSTFVPYLAPNTLVEHQSTQYFTPPFPPGGHSHASGTQDSRSKSSTESKVENDECANDVTTDLELKTPGSTTDQEMSSGQRKSSRLSTNTDGSSSGWCSSSHSVQDISSSSVVGSRKANE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1286 295 Coils Coil 16 36 - -
Lele34g1286 295 CDD bHLH_AtILR3_like 22 96 - -
Lele34g1286 295 PANTHER TRANSCRIPTION FACTOR BHLH121 9 293 IPR044579 GO:0003700|GO:0055072
Lele34g1286 295 Gene3D - 16 99 IPR036638 GO:0046983
Lele34g1286 295 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 88 IPR036638 GO:0046983
Lele34g1286 295 SMART finulus 23 73 IPR011598 GO:0046983
Lele34g1286 295 MobiDBLite consensus disorder prediction 194 295 - -
Lele34g1286 295 Coils Coil 57 119 - -
Lele34g1286 295 MobiDBLite consensus disorder prediction 219 235 - -
Lele34g1286 295 MobiDBLite consensus disorder prediction 238 295 - -
Lele34g1286 295 Pfam Helix-loop-helix DNA-binding domain 18 67 IPR011598 GO:0046983
Lele34g1286 295 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 67 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1286 Lele-ChrLele34 20793527 20796164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1286 10 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 61.905 1.50e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele34g1286 HLH 1.8e-09 No_clan