Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1263 ATGGCTGCGGTTTCAAAGTTCTCTACTTTTTCGTCATCCCTTTCAAGACCTTCCTCCTTCCCTGTCACCACATCAACCGCCACCGCCAACAACAATACATGTTTCTGCGACAAAACCCCCCATAAACCCACACTTTCTCTCGCCGCCGCGGACACCCACAACACATCTTTCACAGTTTCATCTAAAAACCCAATTGCCGATCTCATTCGAGAGAATGAGCCATACCCAGAACCTGAATCAGAATCCTTTCACTTCGACGATGATGATGAAAAGCCACGCGAGGAGTGTGGTGTTGTGGGTATATACGGTGATCCAGAGGCGTCTCGTCTCTGTTATTTGACCCTTCACGCACTCCAGCATCGTGGTCAAGAAGGTGCCGGAATCGTCGCTGTTCACGACAACGTCCTTCAATCGGTTACAGGGGTAGGACTTGTTTCTGAAGTTTTTAATGAATCTAAGCTCGATAAATTACCTGGAAATTTGGCCATTGGGCATGTCCGCTATTCAACCGCAGGCCAGTCGATGCTCAAGAATGTTCAGCCCTTCGTTGCTGGGTATCGATTTGGTTCTGTGGGCATCGCTCATAACGGTAATTTGGTGAATTATCGAACCTTAAGGGCCAATCTCGAAAACGATGGGTCGATTTTTAACACTAGTTCTGATACTGAGGTTGTGCTCCATCTCATTGCAACCTCAAAGCATAGACCTTTCATATTGAGGATCGTTGATGCCTGCGAGAAGATTAAAGGGGCTTATTCTATTGTATTTGTTACTGAGGATAAGCTTGTTGCAGTGAGGGATCCTCATGGATTCCGTCCTCTGGTTATGGGGCGGAGAAGCAATGGAGCTGTAGTGTTTGCCTCTGAAACTTGTGCTCTTGATTTGATTGAAGCAACTTTCGAAAGAGAGGTGAACCCAGGTGAAGTCATAGTGGTGGACAAAAATGGGGTTCAATCTTTCTGCTTAATGTCTCATCCACAGCCAAAACAATGCATCTTTGAGCACATATACTTCGCTCTCCCAAACTCTGTGGTTTTTGGAAGATCAGTGTATGAATCTAGAAGAAAATTCGGCGAAATTCTGGCAACTGAAAGCCCAGTAGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTAGCAGCACTTGGCTATGCTGAAAAAGCAGGTGTTCCTTTTCAACAAGGATTAATCAGGTCTCACTATGTAGGAAGGACTTTCATTGAGCCATCCCAGAAGATCAGAGACTTTGGAGTGAAGCTCAAGCTCGCACCGGTTCGAGCGGTGCTCGAAGGCAAGAGGGTTGTTGTGGTGGATGATTCAATTGTGAGAGGAACCACATCTTCCAAAATAGTGAGGTTGTTAAAAGAAGCAGGGGCTAAAGAAGTTCACATGAGGATTGCTAGTCCGCCAATGATAGGATCATGCTATTATGGAGTGGACACCCCAAGTTCTGAGGAATTGATCTCTAACAGGATGAGTACAGAAGAAGTTAGGAAGTTCATTGGATCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAAGTTGTTAGGCAATGATTCTCCTAATTATTGCTATGCCTGCTTCTCTGGGAACTACCCTGTTGAACCCACGGAGCTGAAAGTGAAAAGAGTTGGTGACTTTGTGGACGATGGCTTAAATGGGAGTTTGGAATCTATCGATGGAGGATGGATTCAAGCAAATCCAAGCATTAAAGAGACAAAGGTTGTTGGTCTCTGA 1749 0.4505 MAAVSKFSTFSSSLSRPSSFPVTTSTATANNNTCFCDKTPHKPTLSLAAADTHNTSFTVSSKNPIADLIRENEPYPEPESESFHFDDDDEKPREECGVVGIYGDPEASRLCYLTLHALQHRGQEGAGIVAVHDNVLQSVTGVGLVSEVFNESKLDKLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGIAHNGNLVNYRTLRANLENDGSIFNTSSDTEVVLHLIATSKHRPFILRIVDACEKIKGAYSIVFVTEDKLVAVRDPHGFRPLVMGRRSNGAVVFASETCALDLIEATFEREVNPGEVIVVDKNGVQSFCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAEKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLAPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPMIGSCYYGVDTPSSEELISNRMSTEEVRKFIGSDSLAFLPFDSLKKLLGNDSPNYCYACFSGNYPVEPTELKVKRVGDFVDDGLNGSLESIDGGWIQANPSIKETKVVGL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1263 582 Pfam Phosphoribosyl transferase domain 355 465 IPR000836 -
Lele34g1263 582 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 96 537 IPR029055 -
Lele34g1263 582 MobiDBLite consensus disorder prediction 72 91 - -
Lele34g1263 582 Pfam Glutamine amidotransferase domain 174 293 IPR017932 -
Lele34g1263 582 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 96 315 IPR017932 -
Lele34g1263 582 Gene3D - 355 519 IPR029057 -
Lele34g1263 582 TIGRFAM purF: amidophosphoribosyltransferase 96 537 IPR005854 GO:0004044|GO:0009113
Lele34g1263 582 MobiDBLite consensus disorder prediction 1 25 - -
Lele34g1263 582 Hamap Amidophosphoribosyltransferase [purF]. 95 536 IPR005854 GO:0004044|GO:0009113
Lele34g1263 582 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 96 320 IPR029055 -
Lele34g1263 582 SUPERFAMILY PRTase-like 331 542 IPR029057 -
Lele34g1263 582 CDD GPATase_N 96 346 IPR035584 -
Lele34g1263 582 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 94 543 - -
Lele34g1263 582 CDD PRTases_typeI 358 469 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1263 Lele-ChrLele34 20704518 20706266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1263 83 569 PRT Gene Family AT2G16570 83.845 0.0 853