Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1262 ATGGGCGATACTGAAGGAGCCCATACTGACATGACGCATAATCTTCAATCCTCGTTCGGAACTTCATCATCTTCGATTATGAAACAACCTTTAAGTATGGACCAACTCAGTGTACCTCAATTCAACCCTTCCCAAATGCGCGCGCGGCATTTTCAGCCGAATTTTTTTGGCGGGGATGGTAATAATAATAAAAGAGTGGGCATACCACCATCACATCCCCACCAGATCCCTCCGATTTCCCCATATTCCCAGATCCCTGTGTCGCGACCCACGTCACAGCAAAATGTTAGCCCAGGACCTACTCATTCGCGATCATTATCACAGCCGCCATTTTTCTCTCTCGATTCTCTGCCTCCCTTAAGTCCTTCTCCTTTTCGAGAGTCCACTTCAACTTCCATCTCAGACCCTGCTTCGGCTGATGTATCTATGGAGGATCGGGATGTAAGTTCGCATTCTTTATTTCCACCTTCACCTTTTACAAGGGGTAATCCTTCACGAGTTGGAGAAAGTTTACCCCCGCGTAAAGCACATAGGCGCTCTAACAGCGATATTCCATTTGGCTTTTCTACTGTTATGCAATCTTCGCCTCCTCTTATTCCACTAAGGGGTTCTGGTGGACTAGATAGGTCATTGTCTGGGAGAGAAAATTCAGGTGTAGGTTTAGCGAAGTCTGCACAATTAGTTAAAAAGGAAACAAGTTGGGACAGAATTGTTGACCACAATATAGAGGGATCGGGTGAGAAGAAATCCCCTGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCATACATGAACTTGGATAACATTGATGCACTTAACTCTTCGGGGACTGATGACAAAAATGGTAATGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGTGATAGCAGTGATGATGAAGCAGAAAGCAGTGTTAACGAAACTGGGGCCAACATGCAAAGACATGGAACCAAATCTTGGAATGAAATGAAGGAAGGGGTGAAAAGGAGTGCGGGAGGAGATATTGCACCCACCACAAGACACTACAGAAGTGTCTCAATGGATAGTTTCATTGGGAAGCTAAACTTTACTGATGACTGCCCTAAACTGCCACCTTCTCCAGGTCCTCGTCCTGGACAGATTTCTCCCACCAATTCAATTGATGGTAACTCATCTGCCTTTAGCTTGGAGTTTGGAAATGGAGAATTTAGTGGGCCTGAGTTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCTTTAACAGATCCGAAGCGGGCAAAAAGGATCTTGGCAAATAGACAATCAGCTGCACGTTCTAAAGAACGAAAGATGCGATACATTTCTGAACTAGAACACAAGGTTCAGACTCTGCAGACAGAAGCTACCACGCTGTCTGCACAGCTGACCCTGTTACAGAGAGATTCGGTGGGGCTCACAAACCAGAATAATGAGTTGAAGTTTCGCCTTCAAGCCATGGAACAGCAGGCAAAACTCCGAGACGCACTAAATGAAGCTCTAACTGCTGAAGTTCAACGACTTAAACTCGCCACGGCTGATTTGAATGGCGAATCTCATGCTTCTGGCTGCATGATCCCGCAGCATTCTATCAACCCTCAGATGTTCCAGTCGCGGAGGCAGCAACCACAGGCATGCCAACCAAACATTCAGATGCAGCAACAGCAACGTCAGCAGAACAATAGTGCCACCTCGAAGACGGACTCAAAACAGTAG 1737 0.4565 MGDTEGAHTDMTHNLQSSFGTSSSSIMKQPLSMDQLSVPQFNPSQMRARHFQPNFFGGDGNNNKRVGIPPSHPHQIPPISPYSQIPVSRPTSQQNVSPGPTHSRSLSQPPFFSLDSLPPLSPSPFRESTSTSISDPASADVSMEDRDVSSHSLFPPSPFTRGNPSRVGESLPPRKAHRRSNSDIPFGFSTVMQSSPPLIPLRGSGGLDRSLSGRENSGVGLAKSAQLVKKETSWDRIVDHNIEGSGEKKSPEGEVVDDLFSAYMNLDNIDALNSSGTDDKNGNENRDDLDSRASGTKINGGDSSDDEAESSVNETGANMQRHGTKSWNEMKEGVKRSAGGDIAPTTRHYRSVSMDSFIGKLNFTDDCPKLPPSPGPRPGQISPTNSIDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAKLRDALNEALTAEVQRLKLATADLNGESHASGCMIPQHSINPQMFQSRRQQPQACQPNIQMQQQQRQQNNSATSKTDSKQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1262 578 MobiDBLite consensus disorder prediction 85 114 - -
Lele34g1262 578 Coils Coil 505 525 - -
Lele34g1262 578 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 105 574 - -
Lele34g1262 578 MobiDBLite consensus disorder prediction 310 324 - -
Lele34g1262 578 MobiDBLite consensus disorder prediction 272 329 - -
Lele34g1262 578 SMART brlzneu 422 486 IPR004827 GO:0003700|GO:0006355
Lele34g1262 578 MobiDBLite consensus disorder prediction 1 224 - -
Lele34g1262 578 Coils Coil 442 497 - -
Lele34g1262 578 CDD bZIP_plant_RF2 427 476 IPR044759 GO:0003700|GO:0006355
Lele34g1262 578 Gene3D - 425 477 - -
Lele34g1262 578 MobiDBLite consensus disorder prediction 122 138 - -
Lele34g1262 578 MobiDBLite consensus disorder prediction 543 578 - -
Lele34g1262 578 SUPERFAMILY Leucine zipper domain 426 477 IPR046347 GO:0003700|GO:0006355
Lele34g1262 578 MobiDBLite consensus disorder prediction 183 197 - -
Lele34g1262 578 FunFam probable transcription factor PosF21 425 478 - -
Lele34g1262 578 MobiDBLite consensus disorder prediction 369 393 - -
Lele34g1262 578 MobiDBLite consensus disorder prediction 9 49 - -
Lele34g1262 578 Pfam bZIP transcription factor 426 480 IPR004827 GO:0003700|GO:0006355
Lele34g1262 578 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 424 487 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1262 Lele-ChrLele34 20697249 20700410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1262 1 544 bZIP Transcription Factor Family AT4G38900 60.784 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele34g1262 bZIP_1 7.5e-09 CL0018