Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1244 ATGTGGGTGTATATGATATTTATAAGTTCAATGTTCCTTTCTTATCTTGTTCATGCTGACAACTTGCAAAATCTCTCAAATATTTCCCTTCAAGATTCTGCCAACACGCCAATCTGTGTTTGTGTGACTCAATCTGAAGCACAAGCTTGCTTCCCAATTCCCATATCAAAAACCCATCTCTTTCTCTTCATTAGAGAGATTCACAGAGAAATGAAGATACTTTGTGATGTGTGTGATAGATCGGAGGCCTCTCTCTTCTGTCCCTCCGACGAAGCTGCTCTCTGCTTCGCCTGTGATCGTACCATCCACCATGCCAACAAGCTCTCTCGCAAACATTCTCGCTTCTCACTTCACCACCCTTCCTCCAATTCCTCTCCTCTCTGCGAAATCTGCCAAGAGAGGAGAGCGTATGTGTTTTGCCAAGAGGACAGAGCGATATTATGCAGAGAATGCGATGTTCCGATTCACAGAGCCAACGAGCATACTCGAAAGCATAACAGGTTTCTTCTCACTGGTGTGAAGCTCTCTGCTTCTATCTCAAGCAATAATGAATCTCACTCTAATAACATGAAGAGACACAGATCATCGTCATCATCGGTTTCAAGTGAGAATGCCGGTTCTTCAATGAAGTATGAGAACATGCCAGCATTTGAGGAGCAGGATATTGAAGCAATTACGTATTTGTTTAGAAGCTCGAGATGA 702 0.4316 MWVYMIFISSMFLSYLVHADNLQNLSNISLQDSANTPICVCVTQSEAQACFPIPISKTHLFLFIREIHREMKILCDVCDRSEASLFCPSDEAALCFACDRTIHHANKLSRKHSRFSLHHPSSNSSPLCEICQERRAYVFCQEDRAILCRECDVPIHRANEHTRKHNRFLLTGVKLSASISSNNESHSNNMKRHRSSSSSVSSENAGSSMKYENMPAFEEQDIEAITYLFRSSR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1244 233 CDD Bbox1_BBX-like 74 117 - -
Lele34g1244 233 PANTHER B-BOX ZINC FINGER PROTEIN 22 71 203 - -
Lele34g1244 233 MobiDBLite consensus disorder prediction 180 209 - -
Lele34g1244 233 FunFam B-box zinc finger protein 21 71 168 - -
Lele34g1244 233 Pfam B-box zinc finger 73 113 IPR000315 GO:0008270
Lele34g1244 233 Pfam B-box zinc finger 125 163 IPR000315 GO:0008270
Lele34g1244 233 CDD Bbox1_BBX-like 127 170 - -
Lele34g1244 233 Gene3D Classic Zinc Finger 71 169 - -
Lele34g1244 233 ProSiteProfiles Zinc finger B-box type profile. 70 117 IPR000315 GO:0008270
Lele34g1244 233 ProSiteProfiles Zinc finger B-box type profile. 123 170 IPR000315 GO:0008270
Lele34g1244 233 SMART bboxneu5 123 170 IPR000315 GO:0008270
Lele34g1244 233 SMART bboxneu5 70 117 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1244 Lele-ChrLele34 20562908 20565381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1244 71 203 C2C2-CO-like Transcription Factor Family AT4G39070 62.774 5.27e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lele34g1244 zf-B_box 9.7e-08 No_clan