Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1240 ATGATCTACTTCCCCTTCTTTCTTTCTCAACTGGTGTACTTGTTGCTTTCCCAAATACTCATGGCTTCCGAGTCTTCTCCGACGAATTTCAACAACGGTCCTTCCTCTCCCGATGATTCATATTCCAGCCCAATCGGCAACACATTATCCTCTCCTGGGGATGATGCTCGCCACAGAGGGCGCCGGCGTTCGTCAACACCGTCTGCATTCGCTACTCCTCCGTCTAATCGATCTCGATTCGCCTCCTCCGATGCTACTCCAACTCCAACGAGGTCCAGGCAAAGGGGAAGTGGTCGGAGAGCGTCTATGTCCACCCCTGTTGCAGCCACGCCCACATCCACTGATGACGCTCCCATGTCATCAGAAGGCGGAGAGGGTTACAATGCAGACGATATTAGGCCTACCTTCGTTTGGGGTACTAATATAAGCGTCGAAGATGTGAATGAGGCGATTCAGAGGTTTTTAAAGCACTTCAGAGAGCAGTCATCTCAGAGCGACGGGCTGCATATGGAGGGAAAATATGAGACGGCTATCAAACAAGTCATTGAAATGGAGGGAGAGTCACTAGACGTCGATGCACACGATGTATTTGATTATGATCCGGATTTGTACACAAAAATGGTCAGATACCCGCTCGAGGTTCTTGCAATTTTTGATATGGTTCTGATGAATATGGTTAGTAGAATCAACCCGTTGTTCGAGAAGCACATTCAAACTCGAATTTTTAATCTAAAAGCCTCCACTTCAATGAGAAATTTGAATCCATCTGATATTGAGAGGATGGTATCATTGAAGGGAATGATTATTCGATGTAGCTCAATTATACCAGAAATCAAGGAAGCTATATTTAGATGTCTCGTGTGTGGATACTGCTCAGAACCTGTTGCCGTAGAGAGAGGGCGAATAGCTGAACCCACTAAATGTCTGAGGGAAGAGTGTCAAGCCAGAAACTCCATGACACTGGTTCACAATCGATGCAGTTTCACAGACAAGCAAATTGTGAGGCTTCAGGAGACACCTGATGAGATACCTGAAGGGGGAACACCACACACAGTAAGCTTGCTGATGCATGACAAGCTAGTGGATGCTGGAAAGCCGGGGGACAGAGTTGAGGTGACTGGTATATATAGGGCTATGAGTGTCAGGGTTGGACCAACTCAGAGAACTGTTAAATCACTGTTCAAGACTTATATTGACTGTCTTCATATTAAGAAGACTGATAACTCAAGAATGATGTCAGAGGATGCAATGGATGTTGAAACTAGCCTGGGCAACAGAAATACAGAAGAAATTCATTTTGATGAAGAAAAGGTGGCTCAACTAAAAGAGCTCTCAAAACAGCCAGATATATATGAAAGGCTGACAAAGTCATTGGCTCCAAACATCTGGGAGCTAGATGATGTGAAGAAAGGTCTTCTTTGTCAGCTTTTTGGTGGAAATGCTTTGAAGTTGGCATCTGGCGCTAACTTCCGTGGTGATCTTAATATATTACTAGTTGGTGATCCTGGAACCAGCAAGTCCCAGCTGCTCCAGTACATACATAAACTTTCGCCCCGTGGCATTTACACAAGTGGAAGGGGGAGCTCTGCTGTTGGACTGACTGCTTATGTTACCAAAGATCCTGAAACAGGCGAAACTGTTCTCGAGAGTGGCGCTCTAGTTTTAAGTGACAGAGGCATCTGCTGTATAGATGAATTTGACAAAATGTCTGAGAATGCCAGAAGCATGTTACATGAGGTGATGGAACAACAAACTGTGTCAATAGCAAAAGCAGGTATTATTGCCTCCCTCAATGCCAGGACTTCAGTGTTGGCTTGTGCGAATCCCAGCGGGTCACGATATAACCCTCGCTTGTCAGTCATTGACAACATACAACTTCCTCCTACACTTCTGTCCAGGTTTGATTTGATCTACTTAATTCTTGACAAGGCTGATGAACAGACAGATAGACGACTTGCCAAGCATATTGTTTCCTTACACTTTGAGAATCCTGAGAGCTTAGAGCAAGATGTGTTGGATCTTCCTACGTTAACTGCTTATGTGAGCTATGCTCGAAAGCATATACACCCACAACTATCTGATGAAGCTGCTGAAGAATTGACTAGAGGTTATGTTGAGATAAGAAGGAGAGGCAATTTTCCAGGGAGTAGCAAGAAGGTGATAACAGCAACACCAAGGCAGATTGAGAGTCTAATACGGCTCAGCGAAGCCTTGGCTCGGATTCGCTTCTCAGAATGGGTGGAAAAGCGGGATGTAATGGAGGCATTTCGGCTTCTAGAAGTTGCAATGCAGCAGTCTGCCACAGATCACTCTACTGGAACCATTGACATGGATCTTATTACTACTGGAGTTTCTGCAAGTGAAAGGATGAGACGAGAAAGTCTGGTACAAGCAACTCGCAACATAATCATGGAGAAGATGCAAATTGGGGGACCATCAATGCGATTATTGGAGTTACTGGAAGAGTTGAAGAAACAGAACGCCAGTGAACTCCACCTCGGTGATCTGAGAAATGCAGTTGCTACTTTGGCCAGCGAAGGATTTGTTGCTCTTCATGGTGACGTTCTTTTAGTGGTCACAAGCCGAGTTCTGAGTGAAGTAGTACGGCGCCCTGTAAATGGTGGCATTGGTAGGCTTTTCATTCCTGTTCTTTATCTTAGAGCCGCCAAGTTGTGCGACGCAAGGCTATCTTGGGTGGTTGAAAGGGTGGAATGCGAGTGA 2721 0.4535 MIYFPFFLSQLVYLLLSQILMASESSPTNFNNGPSSPDDSYSSPIGNTLSSPGDDARHRGRRRSSTPSAFATPPSNRSRFASSDATPTPTRSRQRGSGRRASMSTPVAATPTSTDDAPMSSEGGEGYNADDIRPTFVWGTNISVEDVNEAIQRFLKHFREQSSQSDGLHMEGKYETAIKQVIEMEGESLDVDAHDVFDYDPDLYTKMVRYPLEVLAIFDMVLMNMVSRINPLFEKHIQTRIFNLKASTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIKEAIFRCLVCGYCSEPVAVERGRIAEPTKCLREECQARNSMTLVHNRCSFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTDNSRMMSEDAMDVETSLGNRNTEEIHFDEEKVAQLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGANFRGDLNILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIQLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESLEQDVLDLPTLTAYVSYARKHIHPQLSDEAAEELTRGYVEIRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKRDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLVQATRNIIMEKMQIGGPSMRLLELLEELKKQNASELHLGDLRNAVATLASEGFVALHGDVLLVVTSRVLSEVVRRPVNGGIGRLFIPVLYLRAAKLCDARLSWVVERVECE 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1240 906 MobiDBLite consensus disorder prediction 27 50 - -
Lele34g1240 906 ProSiteProfiles MCM family domain profile. 450 656 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 Pfam MCM P-loop domain 438 660 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 461 776 IPR027417 -
Lele34g1240 906 Pfam MCM OB domain 250 379 IPR033762 -
Lele34g1240 906 MobiDBLite consensus disorder prediction 65 119 - -
Lele34g1240 906 Pfam MCM AAA-lid domain 676 762 IPR041562 -
Lele34g1240 906 FunFam DNA helicase 431 769 - -
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 764 773 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 272 285 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 466 477 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 612 629 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 323 335 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lele34g1240 906 FunFam DNA helicase 277 329 - -
Lele34g1240 906 ProSitePatterns MCM family signature. 559 567 IPR018525 GO:0003677|GO:0005524|GO:0006260
Lele34g1240 906 SMART mcm 246 764 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 MobiDBLite consensus disorder prediction 27 130 - -
Lele34g1240 906 Gene3D - 141 244 - -
Lele34g1240 906 Gene3D - 769 849 IPR036388 -
Lele34g1240 906 CDD MCM4 453 762 - -
Lele34g1240 906 SUPERFAMILY Nucleic acid-binding proteins 169 400 IPR012340 -
Lele34g1240 906 Gene3D - 277 329 - -
Lele34g1240 906 Gene3D - 250 389 IPR012340 -
Lele34g1240 906 Pfam MCM N-terminal domain 149 246 IPR027925 -
Lele34g1240 906 Gene3D - 428 768 IPR027417 -
Lele34g1240 906 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 148 815 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein family signature 630 638 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein family signature 551 565 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein family signature 491 506 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein family signature 579 592 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele34g1240 906 PRINTS Mini-chromosome maintenance (MCM) protein family signature 603 615 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1240 Lele-ChrLele34 20519267 20525533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1240 21 854 Core DNA Replication Machinery Family AT2G16440 75.385 0.0 1276