Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1219 ATGCTTCTTGAACAGGCGTCAGAGAAGAAGCTGGCGAACCCTATGAGGGAAATCAAGGTCCAGAAGCTCGTCCTCAATATCTCAGTTGGCGAGAGTGGAGATCGTCTCGTCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAGACACCAGTTTTCTCCAAAGAACTTGCCACCATGTTGATGATTATCAGAAGGAATGAAAAGATTGCATGCTATGTGACTGTTAGAGATGACAAGGCAATGCAGCTTTTGGAGAGTGGTCTGAAGGTGAAGGAATATGAACTGCTGAGAAGAAACTTCAGTGATACTGGGTGCTTTGGATTTGGCATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCATCTACTGGTATCTATGGAATGGACTTTTATGTTGTTTTGGAGCGCCCCGGTTACCGTGTGGGACGTCGCCGCAGTTCCTTTGACTTGTATCTTTGCCTTGTTTTTGGTTTGAAGGAAAAGATTGCAAAGCAAAAGAAAAAGGAAAAAGAATGA 522 0.4444 MLLEQASEKKLANPMREIKVQKLVLNISVGESGDRLVRAAKVLEQLSGQTPVFSKELATMLMIIRRNEKIACYVTVRDDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRSSFDLYLCLVFGLKEKIAKQKKKEKE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1219 173 FunFam 60S ribosomal protein L11 6 168 - -
Lele34g1219 173 SUPERFAMILY RL5-like 13 152 IPR022803 -
Lele34g1219 173 Gene3D - 7 155 IPR022803 -
Lele34g1219 173 Pfam Ribosomal protein L5 13 55 IPR031310 -
Lele34g1219 173 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 2 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lele34g1219 173 Pfam ribosomal L5P family C-terminus 69 139 IPR031309 -
Lele34g1219 173 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 6 148 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1219 Lele-ChrLele34 20385438 20387040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1219 6 147 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 89.510 2.68e-90 259