Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1203 ATGTTGCGCTGTCTTAACTCCTCCGGCATTTTCACCGGAAACTGCTCCGACATGACGGTGTTGGAAAGGCAGAGGATGAGGATGAAATGGGAACAAGAGCAACAACAACATCACCAAAACCAGAGCTTTTATGACGATTCTGCGCTCGGTGAGGTCGTCGCTAAGTCCATCAAGCCCGAGCTGGGCCACCTCCAATTTCCCAGTTTCGGGTTCGTGTCTACTGGCTTTGAAGCGAGTTCTGCAATTTCAACGACTTCCATGGCAGCAGCTGAAGAACCCAGAGGCAGAGACTCTGTTTCAGACAAGGAGAAGATGAGCTCTGCATGTGGCAAACACAGCTTCAAGAAGAGAAAATCCGATAACGCTCATAGCTCCAAGGTTGTTGCAGAGAGTGAAAACAAAGAGAAGAAGATGAAAGCAAGTGGAGAAGAAGGAGAATCGAAAATAACAGAGCAAAATAGCAGCAAGAACACAACAACCAACAACAACGTCAACAGCATCAAAGAAACATGCGGAGGAACCTCAAAGGGAAATTCGAAGGCGTCGGAGGTTCAAAAGACCGATTACATCCATGTCCGAGCACGTCGTGGGCAAGCCACAGACAGCCATAGCTTAGCAGAAAGAGTTAGAAGGGAAAAGATCAGTGAGAGAATGAAGTATTTGCAGGATTTAGTACCAGGCTGTAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAGATCATCAACTATGTTCAATCTCTTCAACGCCAAGTAGAGTTCTTGTCCATGAAATTAGCTGCTCTAAACCCAGCACTTGAATTCAACATTGATGATCTCTTCTCCAAAGAGGATTTTAGTACTTGTGGCGGTCCAAGTTTTGCAACATTTGGGATGGGATCAGACATGAACAATCCATCAGCATATGTTCAGTTCAACAACAACTCAGGGCAACAACAATTTCCTCCTTCAATCCCCGAAACGTTTCTTGACTCCTGCTGTTTCCCTCAAATTCTACCACCTTCTACTTACGAATCTGACCTTCACAATCTAATCAATGTGGGTTTTGATCAAGCACATCGAGCAACAGCAGCATCGTTTCTTTCTCAGCCATTCACAGGTGTAGTTGAAGCTAGCATTCCAAAGATGGAGATGTAG 1137 0.4503 MLRCLNSSGIFTGNCSDMTVLERQRMRMKWEQEQQQHHQNQSFYDDSALGEVVAKSIKPELGHLQFPSFGFVSTGFEASSAISTTSMAAAEEPRGRDSVSDKEKMSSACGKHSFKKRKSDNAHSSKVVAESENKEKKMKASGEEGESKITEQNSSKNTTTNNNVNSIKETCGGTSKGNSKASEVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAALNPALEFNIDDLFSKEDFSTCGGPSFATFGMGSDMNNPSAYVQFNNNSGQQQFPPSIPETFLDSCCFPQILPPSTYESDLHNLINVGFDQAHRATAASFLSQPFTGVVEASIPKMEM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1203 378 Pfam Helix-loop-helix DNA-binding domain 202 249 IPR011598 GO:0046983
Lele34g1203 378 SMART finulus 204 254 IPR011598 GO:0046983
Lele34g1203 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 266 IPR036638 GO:0046983
Lele34g1203 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 248 IPR011598 GO:0046983
Lele34g1203 378 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 103 307 IPR024097 GO:0006355
Lele34g1203 378 MobiDBLite consensus disorder prediction 94 150 - -
Lele34g1203 378 Gene3D - 195 270 IPR036638 GO:0046983
Lele34g1203 378 MobiDBLite consensus disorder prediction 151 184 - -
Lele34g1203 378 CDD bHLH_AtBPE_like 188 273 - -
Lele34g1203 378 FunFam Basic helix-loop-helix transcription factor 195 267 - -
Lele34g1203 378 MobiDBLite consensus disorder prediction 85 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1203 Lele-ChrLele34 20317857 20319931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1203 9 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 42.340 4.71e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele34g1203 HLH 2.1e-06 No_clan