Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1200 ATGGCGTCTGCTGAAGTTGAATACAGATGCTTCGTCGGGGGGCTCGCATGGGCCACCGACAGCGAGGCCCTTGAGAAGGCCTTTGCTCCCTTTGGCGAAATCGTCGAATCGAAGGTTATTAATGATCGTGAGACTGGCAGATCAAGAGGGTTCGGCTTCGTAACCTTCTCGTCTGAGCAGGCCATGAGAGATGCTATCGAGGGGATGAACGGCCAGGATCTCGATGGCCGTAATATCACTGTCAACGAGGCTCAGTCTCGTGGCGGCGGAGGTGGTGGAGGCGGCGGATATGGTGGTGGAGGAGGATATGGTGGTGGAGGCGGATATAGCCGTCGTGGAGGCGGATACGGAGGTGGAGGCCGCCGTGAAGGGGGATACAACCGTAACGGTGGTGGAGGCTACGGAGGAAACGGCGGTGACGGCTATGGCGGTGGTGGTTATGGCGGTGGACGTGACCGTGGTTATGGTGGTGGTGACGGTGGATCTCGTTACTCCAGAGGTGGAGGTGCTTCTGACGGAAGCTGGAGGAGCTAG 534 0.588 MASAEVEYRCFVGGLAWATDSEALEKAFAPFGEIVESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGGGGGGGGGYGGGGGYGGGGGYSRRGGGYGGGGRREGGYNRNGGGGYGGNGGDGYGGGGYGGGRDRGYGGGDGGSRYSRGGGASDGSWRS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1200 177 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Lele34g1200 177 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Lele34g1200 177 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 9 167 - -
Lele34g1200 177 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Lele34g1200 177 MobiDBLite consensus disorder prediction 82 104 - -
Lele34g1200 177 Gene3D - 2 104 IPR012677 -
Lele34g1200 177 MobiDBLite consensus disorder prediction 124 177 - -
Lele34g1200 177 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1200 Lele-ChrLele34 20292473 20293289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1200 10 81 Eukaryotic Initiation Factors Gene Family AT2G23350 41.667 1.01e-10 57.8