Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1199 ATGGGGGATCATCGGCGAAACATAGTGTCTCTCGGGTTCTTGTTCTTGTTGCTTTTTCAGTTCACACTTGAACAGCTTGAGCCTCTGAGTTCGCCCGCAGAGCGACTTGCGCTACTTCAACTTCGATCTTCCTTGGGCTTGAGAACCAGGGAATGGCCTATAAAAGCCGACCCTTGCTTAATCTGGAATGGCGTAAGCTGTGAGAATGGTAGAGTCACTGGGATCAATATTTCTGGGTTTAGAAGAACAAGACTTGGGAGGCAAAACCCGCAATTCTCCGTTGATTCTTTAGCCAATTTGACCTTCCTGCAATCCTTCAATGCGTCCAAGTTTCTTCTTCCTGGTCCTGTTCCTCACTGGTTTGGCCAAAAGCTTTCTTCTCTCAGATTGCTTGATCTTCGTTCTTGCTCCATCACTGGTGCAATTCCTTCTACTCTTGGGAATCTAACAATCCTAACCACTCTCTATTTATCTGATAATAACCTCACTGGGATCATTCCTGATAGTCTAAGTCAACTTTCAGCCCTTTCTGTTCTTGATCTTTCCCGGAATTTTCTCTCAGGATCCTTGCCCACATCCTTTGACTTTCTTGGGAATCTTTCTTTCCTTGACATTTCTTCCAACTATTTATCCGGGTTGATTCCCCAAGGCATTGGGTCACTTTCTAAATTACAATACTTGAATCTTTCCAACAATGGTCTAACTTCTACCATACCTGCTCAACTTGGGGATCTTAGTAACCTAGTTGACCTTGATCTAAGTGATAATTCCTTGTACGGTGTGGTGCCTCCGGATTTAATGGGGTTGAGGAGCTTGCAGAGAATGAAGCTTGGGAACAACATTTTTTATGGTCCTTTGCCAGAGAACTCGTTTCATACTACATGGCAGTTGCAGTTCATAGAGCTGAGACAAAATAATTTTACTGGGACCTTGCCTGATAACTTGTGGTATCTTCCAAGATTGAGCTTTGTGGATGTCTCCAGTAATAACTTCACTGGTGTGCTTCCTAGTTCTAGTTCTACTGCTAATGCTACTACTCCTACAGTTAAGGGCAACATTTCTCATAATCTATTTTATGGAAGCATCACTCCTCTGCTCAAAAGGTTCAGTTTCATTGATCTGGCAAGCAATTATTTTGAGGGCAAGGTTCTGGATTTCGTAGGTAACGCATCACTGGGTAGCAACTGCCTCCAAAATGTATCAAATCAGAGGACAGCAGCAGAATGCGTCTCATTCTATTCCAAGAGGGGCTTCTCTTTTCATAATTTTGGGCAAGCAAACATGACAAGACCCCGTGCAGCAGAAACCTCTAGGAAGAACAATAGAAGAAAAATTATACTAGCAGGAATTTTGAGTGGAATTGGTTTGATTGCAGTTTTGGTGTTCCTGCTGGTGTTGTTGATTCTCTGTACTCGTAAGAGGAGTAAATCAAATTATACAGGAGCTGGTTTGGGGGATGGTCTTGCTGGTGGCAGTCGTGGACCTGCTGATGCGTTGATAGAATTATCAAAAGTAGCAGACTCATTTACATATCAGCAATTGGTCAAGGCTACAGGTGATTTCAGTAATGCGAATCTTATCAAACACGGTCACACAGGTGATCTCTTCAATGGTGTTTTGGAAAGTGGGATATCTGTAGTCTTAAAAAGGATTGATTTGAGTTCAACTAAAAATGAGAATACTTACATGTCAGAATTGGACCTGTTCAGTAAAGTTTCTCATACAAGATTGGTTCCCCTGTTGGGTCATTGCTTAGAAAATGACAATTTGAAGTTCCTGGTTTATAAACATATGCCAAATGGGAACTTGTTGACTTGCTTGCACAACCGAGAAACTATATATGAAGATGGTACATTGCAGTCATTGGATTGGATAACAAGATTGAAAATTTCTATTGGAACTGCGGAGGCCATATGTTATCTGCATCATGAATGCAATCCACCATTTGTTCACAGGTCTGGATTTGCCTCTAGCTCAAATTTGACTTTTTTGTTCTTTCAATATACATATAGGGTTTGCATAACTTTAGTTAACTGTATGAATGGAGTGACTTGTCTGTGTTTTGGATACTACAGAGATATTCAAGCAACCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGCACTCAGGAAGGGGATACTCATCAAAATAGAATCTCAAGGTTGCTACGGTTACCCCAGTCATCTGATCAAGGCTCATCAGGTTCATCACCAGCAGTTTGTGCCTACGATGTGTATTGCTTTGGCAAAGTATTGCTTGAGATGGTAACTGGGAAGCTGGGGATTGGTGCATCTCGTGAAGCAGAAGTAAAAGAATGGTTGGAACAGACACTGCCTTACATTAGTAATTATGACAAGGATCTTGTAACCAAGATTGTGGATCCATCCATGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCGGTGGCTATCATCGCCAAGACTTGCGTCAACACTAAACCTTCAAGACGACCCCAGATGAGATATGTCCTCAAGGCTCTTGAAAACCCTCTAAAAGTCATAAGGGAAGACAATTACAGTTCTTCTGCAAGGCTAAGAACAACCTCTTCAAGAGGCTCTTGGAATGCTGCTATATTTGCTAGTTGGCGTCAGAATTCTGATGTAACAGTGATTCCGGCAGCTTCTGGTGAAGGCGAGCTTTCATTGTCCCGTCGGCGTCATTCGAATGAGATAGGTCCCGAACCATCTAGCAGCATTCAAGAGGTAGAAGAGAAGCAAGACTAG 2772 0.4217 MGDHRRNIVSLGFLFLLLFQFTLEQLEPLSSPAERLALLQLRSSLGLRTREWPIKADPCLIWNGVSCENGRVTGINISGFRRTRLGRQNPQFSVDSLANLTFLQSFNASKFLLPGPVPHWFGQKLSSLRLLDLRSCSITGAIPSTLGNLTILTTLYLSDNNLTGIIPDSLSQLSALSVLDLSRNFLSGSLPTSFDFLGNLSFLDISSNYLSGLIPQGIGSLSKLQYLNLSNNGLTSTIPAQLGDLSNLVDLDLSDNSLYGVVPPDLMGLRSLQRMKLGNNIFYGPLPENSFHTTWQLQFIELRQNNFTGTLPDNLWYLPRLSFVDVSSNNFTGVLPSSSSTANATTPTVKGNISHNLFYGSITPLLKRFSFIDLASNYFEGKVLDFVGNASLGSNCLQNVSNQRTAAECVSFYSKRGFSFHNFGQANMTRPRAAETSRKNNRRKIILAGILSGIGLIAVLVFLLVLLILCTRKRSKSNYTGAGLGDGLAGGSRGPADALIELSKVADSFTYQQLVKATGDFSNANLIKHGHTGDLFNGVLESGISVVLKRIDLSSTKNENTYMSELDLFSKVSHTRLVPLLGHCLENDNLKFLVYKHMPNGNLLTCLHNRETIYEDGTLQSLDWITRLKISIGTAEAICYLHHECNPPFVHRSGFASSSNLTFLFFQYTYRVCITLVNCMNGVTCLCFGYYRDIQATSILLDDKYEVRLGSLSEACTQEGDTHQNRISRLLRLPQSSDQGSSGSSPAVCAYDVYCFGKVLLEMVTGKLGIGASREAEVKEWLEQTLPYISNYDKDLVTKIVDPSMVVDEDFLEEVWAVAIIAKTCVNTKPSRRPQMRYVLKALENPLKVIREDNYSSSARLRTTSSRGSWNAAIFASWRQNSDVTVIPAASGEGELSLSRRRHSNEIGPEPSSSIQEVEEKQD 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1199 923 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Lele34g1199 923 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Lele34g1199 923 SUPERFAMILY L domain-like 97 346 - -
Lele34g1199 923 Gene3D Ribonuclease Inhibitor 31 191 IPR032675 -
Lele34g1199 923 Gene3D Ribonuclease Inhibitor 293 406 IPR032675 -
Lele34g1199 923 FunFam Predicted protein 492 597 - -
Lele34g1199 923 Gene3D Ribonuclease Inhibitor 192 292 IPR032675 -
Lele34g1199 923 ProSiteProfiles Protein kinase domain profile. 521 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1199 923 MobiDBLite consensus disorder prediction 895 923 - -
Lele34g1199 923 FunFam Putative LRR receptor-like serine/threonine-protein kinase 684 864 - -
Lele34g1199 923 Gene3D Phosphorylase Kinase; domain 1 495 597 - -
Lele34g1199 923 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Lele34g1199 923 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 289 - -
Lele34g1199 923 Pfam Protein tyrosine and serine/threonine kinase 526 652 IPR001245 GO:0004672|GO:0006468
Lele34g1199 923 SMART LRR_typ_2 221 244 IPR003591 -
Lele34g1199 923 SMART LRR_typ_2 197 220 IPR003591 -
Lele34g1199 923 SMART LRR_typ_2 125 148 IPR003591 -
Lele34g1199 923 SMART LRR_typ_2 245 269 IPR003591 -
Lele34g1199 923 SMART LRR_typ_2 149 172 IPR003591 -
Lele34g1199 923 SMART LRR_typ_2 173 196 IPR003591 -
Lele34g1199 923 SMART LRR_typ_2 318 341 IPR003591 -
Lele34g1199 923 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 199 842 - -
Lele34g1199 923 SMART tyrkin_6 521 843 IPR020635 GO:0004713|GO:0006468
Lele34g1199 923 Gene3D Transferase(Phosphotransferase) domain 1 598 864 - -
Lele34g1199 923 SUPERFAMILY Protein kinase-like (PK-like) 513 849 IPR011009 -
Lele34g1199 923 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1199 Lele-ChrLele34 20279720 20283154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1199 33 735 Miscellaneous Gene Families AT2G16250 51.622 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lele34g1199 PK_Tyr_Ser-Thr 5.6e-12 CL0016