Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1193 ATGGCCTCTAACGACTCTCCCGACCATGGTCTTGCTCAGCTCTCTAATAAAACTCCATTTCTCGGTTTAAAGATCTACTTCCTGATCGGCATTTTCCTTCTAATCGTGCTGGTAATTTTGCTTCTGGTCTTTCTGTGCACTCGCCGGAATCGAGTCTCGACGAATCGTAAAATGGTTGTGAAGCACAGTTTTGGGACGATTCCCTTGGTCTCCAAGGAGATCGTCGAAGTCAAAGCCTTGGATCTCGAGCAGAATTGTGAGCAAGCAGGGGTTAAAATCGAGGATGAGGATCCGAAGAAGGAGAAGGTTGAGATTGAGGTTGAGAGAAAAGGGAAGAAGACGAGCGACGAGAGTGATGTGTCCGATGGGAGCCGCAGTTACGTGTCGGTGGACACACCGAACATAGGGTGGGGACGATGGTATAGCTTGAAGGAGTTGGAGGATGCGACACGTGGGTTTGCTAAAGAAAGTGTGATCGGTGAAGGAGGGTATGGTATTGTGTACAAAGGAGTTCTTGAAGACGGGTCGGTGGTGGCTGTGAAGAATCTTCTGAACAACAAGGGTCAAGCAGAGAAGGAGTTCAAGGTGGAGGTTGAAACCATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTAGTTGGATATTGTGCAGAAGGTCCTCAAAGGATGCTTGTTTATGAGTACGTTAATAATGGAAATTTGGAGCAGTGGTTACATGGTGATATTGGGCCCGTTAGCCCCTTGACATGGGATATACGGATGAAAATTGCCATTGGGACAGCAAAAGGGGTGGCTTATCTGCATGAAGGGTTAGAACCCAAAGTGGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGACAGAAATTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGTTATTAGGCTCTGAGAAGACCTATGTGACCACACGTGTAATGGGGACATTTGGATACGTTTCACCTGAGTATGCAAGCACGGGAATGCTTAACGAGGGAAGTGATGTGTATAGCTTTGGAGTTCTACTCATGGAGATAATTACTGGAAGAAGTCCCATCGACTATTCTAGACCACCTGGAGAGATGAATTTGATTGATTGGTTCAAGGGAATGGTAGCAAGTCGTCGCGAGGAACAGCTGGTAGATCCTTTGATTGAGGTTCAGCCCTCTCCTAGATCTTTGAAACGAGCTTTGCTGGTTTGCCTACGCTGTGTAGATTTGGATGTTAGTAAACGACCAAAGATGGGTCAAATCATTCATTTGCTTGAGGCTGATGATTTCCCCTTTCGTTCTGAACTTCGTACAATAAGAGAGAAAGAGCCAGCTCCTTCACAATTCCCCGTAAAGTTCAATATACCCCTAATTAAGAATGAGGATTCTATAGAACAGTCAAGATGGAAATGA 1410 0.4511 MASNDSPDHGLAQLSNKTPFLGLKIYFLIGIFLLIVLVILLLVFLCTRRNRVSTNRKMVVKHSFGTIPLVSKEIVEVKALDLEQNCEQAGVKIEDEDPKKEKVEIEVERKGKKTSDESDVSDGSRSYVSVDTPNIGWGRWYSLKELEDATRGFAKESVIGEGGYGIVYKGVLEDGSVVAVKNLLNNKGQAEKEFKVEVETIGKVRHKNLVGLVGYCAEGPQRMLVYEYVNNGNLEQWLHGDIGPVSPLTWDIRMKIAIGTAKGVAYLHEGLEPKVVHRDIKSSNILLDRNWNAKVSDFGLAKLLGSEKTYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLIDWFKGMVASRREEQLVDPLIEVQPSPRSLKRALLVCLRCVDLDVSKRPKMGQIIHLLEADDFPFRSELRTIREKEPAPSQFPVKFNIPLIKNEDSIEQSRWK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1193 469 MobiDBLite consensus disorder prediction 104 120 - -
Lele34g1193 469 FunFam Probable serine/threonine-protein kinase At1g01540 133 228 - -
Lele34g1193 469 ProSiteProfiles Protein kinase domain profile. 153 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1193 469 PANTHER OS01G0323000 PROTEIN 12 441 - -
Lele34g1193 469 Pfam Protein kinase domain 154 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1193 469 MobiDBLite consensus disorder prediction 104 125 - -
Lele34g1193 469 SUPERFAMILY Protein kinase-like (PK-like) 132 425 IPR011009 -
Lele34g1193 469 Gene3D Phosphorylase Kinase; domain 1 124 228 - -
Lele34g1193 469 FunFam Putative receptor-like serine/threonine-protein kinase 229 439 - -
Lele34g1193 469 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Lele34g1193 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Lele34g1193 469 Gene3D Transferase(Phosphotransferase) domain 1 229 434 - -
Lele34g1193 469 SMART serkin_6 153 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1193 469 CDD STKc_IRAK 159 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1193 Lele-ChrLele34 20240916 20244208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1193 133 425 Receptor kinase-like Gene Family AT4G02010 47.811 4.38e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele34g1193 Pkinase 4e-46 CL0016