Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1188 ATGGCTTCCAGTTCCGATTCCCCGCCTTCGCCTGATTCATCTTCGTCGGATTCTCCTCCGTCACCGCCACCACCGGATTCAAGTTCATCTGACGATTCCTCTCCCTCTCCGCCTCCACCACAATCCCCTCCTTCGTCATCCCCACCGCCATCATCGCCACCCCCACCCGACGCCCAATCCCCCCCACCGCCATCCGACCAAGACAATGGTGGAGACAACGATGATAATTCATCTCCTCCCCCTCCACCACCTTCTAATGGAAACGATCACAGCGATGGAAATAATAACAAAAGCCCTCCGCCTCCACCACCGCCATCGAATTCCAAGGGAGAGTTTTCGCCTCCGCCGCCAGTGCACCGGTTGTCTCCACCGGAAAAAAGTTCACATGATGGATCATCATCGGATAATCCATCACCCCCAGGTAGCAATAGCGATGGATCTCAGTTGAGCGTACCAACTATTATTGGTTTGGCTGCTGGTGCTGGCTTGTTGCTGCTTGTGTTCATCCTCGTCTTCGTTGTATGCAACAGGAGAAAGAAGAAGAGATCTGAGGGTCCCCTTATTTACTACACCAACCAAAAATACGATGATGACTATTACAAGCACGCGAAGAAGGGAAACAATTGGAACAATACTGGTTATAACGCGGGTGATCAACACGTTATGAATATGCCAACACCTCCAGGAGCAGTAGGGAACAAGGTTCCTTGGGGAGCACCGCCGGCTCCATTCTCTGGAAATATGAAAAGCGATGAGATGAGCAGCGCTAGCTATTCAGGGCCGGTGGGTCCGATGCCGCCGCCGCCACCACACCCATTGGTGGCTCTAGGGTTCAACAAGAGCACATTCACTTACGAGGAGCTAGCGGCAGCAACAAATGGGTTCGCCCAAGGGAACCTACTTGGACAAGGTGGGTTCGGGTATGTGCACAAAGGAGTGCTGCCCAACGGGAAGGAAATAGCAGTGAAAAGTCTCAAGTCCACCGGAAACCAAGGTGACAAAGAGTTTCAGGTTGAGGTTGATATCATTAGCCGAGTCCATCACCGCCATCTCGTTTCTCTTGTTGGCTATTGCATTCAAGAGGGCAGTAGTCTCTTGGTCTATGAGTTCGTGCCCAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCCGTTATGGATTGGCCTACTAGGCTCAAAATTGCAATTGGATCGGCCAAGGGACTTGCCTACTTGCACGAGGACTGCCACCCTCGAATCATCCACCGTGACATAAAGGGCGCAAATATTCTACTCGAAAACAACTTCGAAGCCAAGGTGGCAGATTTTGGATTGGCTAAGTTCACACAAGACAACAACACCCATGTTTCCACCCGTGTAATGGGAACATTTGGGTATTTGGCTCCCGAGTATGCTTCAAGTGGCAAATTAACAGAGAAGTCTGATGTGTTCTCATTCGGAATTATGCTTCTGGAGCTCATAACAGGACGACCTCCCGTTGACACCACTGGAGATTATGAAGAGGACAGTTTAGTTGACTGGGCTAGACCTCTTTGCATGAAGGCCATGGAAAGTGGAAGCTTTGAAGGTCTGATGGATTCACGACTTGGCAACAATTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGCTGCCAGCTTCAGACACTCAGCAAGAAGGCGACCAAAAATGAGCCAAATAGTAAGGGCATTGGAGGGTGACGTGTCACTAGCTGATCTGAGAGAGGGGGTGAAGCCAGCGCAAAGTACAATATTCACAAATAACAGTACGGAGTATGATGCAAGCACTTACAGTGCGGACATGAAGAAGTTCAGGAAGCTTGCATTGGAGAGCGGCTATGCCAGCAGTGAGTTTGGCCACACTAGTGAGTATGGTCTCAACCCTTCCTCCTCTAGCAGCGAGGCAGATCACTCTTCCGAATACACCAAGACGACCAAACCCGCTCTATACTGGTTTTTTTCCTACTTTTTGACAACACCCGTGCCGTACTTGATCTGTGTGAATCGATACACCGAGGTGGGGGCAATTTCCTCTTCATTTCGCCTCGCAAGCTCCTCATTTCCAAACTTCACTGGAGTGCCGGCAGACTCGTATACAGAGAGAGGATAG 2121 0.5035 MASSSDSPPSPDSSSSDSPPSPPPPDSSSSDDSSPSPPPPQSPPSSSPPPSSPPPPDAQSPPPPSDQDNGGDNDDNSSPPPPPPSNGNDHSDGNNNKSPPPPPPPSNSKGEFSPPPPVHRLSPPEKSSHDGSSSDNPSPPGSNSDGSQLSVPTIIGLAAGAGLLLLVFILVFVVCNRRKKKRSEGPLIYYTNQKYDDDYYKHAKKGNNWNNTGYNAGDQHVMNMPTPPGAVGNKVPWGAPPAPFSGNMKSDEMSSASYSGPVGPMPPPPPHPLVALGFNKSTFTYEELAAATNGFAQGNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGNQGDKEFQVEVDIISRVHHRHLVSLVGYCIQEGSSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRPPVDTTGDYEEDSLVDWARPLCMKAMESGSFEGLMDSRLGNNYDMQEMARMVACAAASFRHSARRRPKMSQIVRALEGDVSLADLREGVKPAQSTIFTNNSTEYDASTYSADMKKFRKLALESGYASSEFGHTSEYGLNPSSSSSEADHSSEYTKTTKPALYWFFSYFLTTPVPYLICVNRYTEVGAISSSFRLASSSFPNFTGVPADSYTERG 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1188 706 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1188 706 MobiDBLite consensus disorder prediction 13 63 - -
Lele34g1188 706 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 160 621 - -
Lele34g1188 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Lele34g1188 706 Gene3D Phosphorylase Kinase; domain 1 273 370 - -
Lele34g1188 706 SMART serkin_6 295 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1188 706 Pfam Protein tyrosine and serine/threonine kinase 298 567 IPR001245 GO:0004672|GO:0006468
Lele34g1188 706 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lele34g1188 706 MobiDBLite consensus disorder prediction 96 122 - -
Lele34g1188 706 SUPERFAMILY Protein kinase-like (PK-like) 271 568 IPR011009 -
Lele34g1188 706 MobiDBLite consensus disorder prediction 1 147 - -
Lele34g1188 706 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 271 370 - -
Lele34g1188 706 MobiDBLite consensus disorder prediction 127 147 - -
Lele34g1188 706 Gene3D Transferase(Phosphotransferase) domain 1 371 580 - -
Lele34g1188 706 FunFam Proline-rich receptor-like protein kinase PERK1 371 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1188 Lele-ChrLele34 20207857 20212887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1188 133 647 Trihelix Transcription Factor Family AT1G70460 47.389 3.91e-148 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele34g1188 PK_Tyr_Ser-Thr 1.2e-45 CL0016