Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1172 ATGTGGTCGTATCAGGTGTATCATAATTCCGGGTCTGCTGCAATACCCTTTGTAAATTCGTATACAGCTGAATTTTCCCTTCATCCCAACATTTGGGTAAACCAGAAATACAGCATGCCACTTCAATATGAAACTCAGCATGATAACAGGAGTCTCTCCAGCCATCTTGTTGTATCTGATGTAATCATGAATAATTTCAGTGCACTCCCATTGTTTTTTAAACATTTATCGGCATGGCTTTTTGTCCTATGGGGTGGGGTGGGTGCTGCCTTGACAACTTCAGAAAGAGAACAAAGTATATTCATTGGGAAGGAAATTGATTCAAGAACATTATGTGATGGGAACTTACAGCCTGGAAGTACCATTGCTAGGAAATCAAGAGAAAATGGTCACGGGTCTTCAATGCCCGATAGTGCAAGAGATAGACCTTCATGGGTATCATCAGATGAAGGCCATGGCATTGATGATGCTAACAACAATGAATTTTTTATTAAGAAGCAGCAATGTGATGCCATGCGTTCCAATGGTGATGCTGCTGTGGAGGAGGCTACTGATACTGAAAACTTCAATACTGTTCATGTGAATAGAAATTCTGAATCGGAGGATATTGCAATTAATTCAGCTGAACTGAATGCCAACTTGGGAAACAATGTAACTGAGACTAAGCCCCGACTTTCTAAGCTGGAAGAAGATGAAACAAGAAAAGAAAGAAAAAGGCAGTTAAACAGGGAATCAGCTCGAAGATCAAGAATACGCAAGCAGCAAGAACTCGAAGAACTACAAAATATTGTGGACAATCTTATCCGCGAAAATTCCGCTCTGAAGAAAAAGCTAATGAGACTTTCCGAGGATTGTATGGAGCTCTCTGGTTCAAACGACTCCATTGGGAGAGAGCTGATTGAGGAGTATGGACCAGAAATAATCGCCGATCTTGTGGCCACCAAGCCAGCTAGAATCCCTTCTGATGAAAGCCCAAAGATAGTCAAGGCAGGAAGCAACGCATCAAAATCCATCAATTGA 1020 0.4147 MWSYQVYHNSGSAAIPFVNSYTAEFSLHPNIWVNQKYSMPLQYETQHDNRSLSSHLVVSDVIMNNFSALPLFFKHLSAWLFVLWGGVGAALTTSEREQSIFIGKEIDSRTLCDGNLQPGSTIARKSRENGHGSSMPDSARDRPSWVSSDEGHGIDDANNNEFFIKKQQCDAMRSNGDAAVEEATDTENFNTVHVNRNSESEDIAINSAELNANLGNNVTETKPRLSKLEEDETRKERKRQLNRESARRSRIRKQQELEELQNIVDNLIRENSALKKKLMRLSEDCMELSGSNDSIGRELIEEYGPEIIADLVATKPARIPSDESPKIVKAGSNASKSIN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1172 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 232 288 IPR004827 GO:0003700|GO:0006355
Lele34g1172 339 PANTHER G-BOX-BINDING FACTOR 3-RELATED 130 306 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele34g1172 339 MobiDBLite consensus disorder prediction 223 251 - -
Lele34g1172 339 MobiDBLite consensus disorder prediction 113 157 - -
Lele34g1172 339 MobiDBLite consensus disorder prediction 215 251 - -
Lele34g1172 339 MobiDBLite consensus disorder prediction 320 339 - -
Lele34g1172 339 MobiDBLite consensus disorder prediction 113 128 - -
Lele34g1172 339 SMART brlzneu 230 294 IPR004827 GO:0003700|GO:0006355
Lele34g1172 339 Coils Coil 243 284 - -
Lele34g1172 339 SUPERFAMILY Leucine zipper domain 234 288 IPR046347 GO:0003700|GO:0006355
Lele34g1172 339 Pfam bZIP transcription factor 231 289 IPR004827 GO:0003700|GO:0006355
Lele34g1172 339 Gene3D - 221 291 - -
Lele34g1172 339 CDD bZIP_plant_GBF1 235 286 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1172 Lele-ChrLele34 20114062 20117818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1172 211 311 bZIP Transcription Factor Family AT4G36730 41.584 3.82e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele34g1172 bZIP_1 1.2e-12 CL0018