Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1151 ATGCCGCGACCTTGCTTTCACAAGCTTATTTGTCCCTCCACGCTCCAATCCCGGCAGCTGACTATTCCAGATAATTTTCTGAGAAATTTTGGGGGTGATCTTTCTACAGTTGCTACCCTCGCTGTCCCTGATGGCAGTGTCTGGCGAGTAGGATTAAAAAGGTTGGGTAACAAATCTTGGCTCATAGATGGCTGGCAGGAATTTGTTCAACGCTACTCCATTTGTGTTGGTTACTTGCTGGTATTCAGATATGAAGGGAAATCATCATTCAATGTTCATATTTTCAATTTGGCTACTTGTGAGATAAATTACCAATCAAACACACGGAGCAGTAATGAAGGGACTTTCTTTCCAAATCAACATCTTAATTTTGATGATCTTGAAGATGAAGACGACTCCATTGAATTCTTAGATTCATCACCTTCATCCCTTACTCCTGGTGCATTGCAGAACAAGGCTTTTCCTGGAACCTCAGCATTGCAGAATTTGTTCCATGGGTCTAAACTTAACTCCATAAACTGGGGAGATGGGGGGAATTCCCTTTCTCCTGAGGTTGCTAATTCTCAAGACAATCAATCAAGCAGAAATATAGGTGTTCAGTTTAATGCAGTTGAGTTCAAAAAGTCTACTGAAGAGCTAAGATTGCGGTTCTCTAATGAGGAAACGCAAAGAGTTAAGAAAACTATAAGAAAGAAGCGGAAAATGGATTCTAATGGACAAGAACCCTCAGCTCAACATGAAGAAGAGGGGGAAATGCGCTATAGATTTTATGAAAGTGCTTCTGCGAGAAAAAGAACTGTGACAGCTGAAGAAAGAGAAAGGGCAATCAATTCAGCAAAAGCATTTGAACCGGCTAATCCTTTCTGTCGGGTTGTCTTGCGACCCTCCTATTTATACAGGGGATGCATAATGTATTTGCCATCCTGTTTTGCAGAAAAGCATTTGAATGGGGTTTCAGGATTCATTAAACTGCAGATCTCTTCTGATGGAAAACAGTGGCCTGTCCGCTGCCTTTACAGAGGAGGGAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTTTCACTGGAAAATAATTTAGGCGAAGGGGATGTCTGTGTTTTTGAACTTCTTAGAATGAAGGAGGTAGTGTTGAAAGTTACTATATTTCGTGTCACTGAGGATGCAGGATTGATGAGCCCTCCTATGCATCAACACCAAAACGTCAGCCCAATTAAACTGTTGAATACTCCTATGCCGCAAGCCATCGTGCCGGTGAAACTGATTAGAAACTAG 1272 0.4182 MPRPCFHKLICPSTLQSRQLTIPDNFLRNFGGDLSTVATLAVPDGSVWRVGLKRLGNKSWLIDGWQEFVQRYSICVGYLLVFRYEGKSSFNVHIFNLATCEINYQSNTRSSNEGTFFPNQHLNFDDLEDEDDSIEFLDSSPSSLTPGALQNKAFPGTSALQNLFHGSKLNSINWGDGGNSLSPEVANSQDNQSSRNIGVQFNAVEFKKSTEELRLRFSNEETQRVKKTIRKKRKMDSNGQEPSAQHEEEGEMRYRFYESASARKRTVTAEERERAINSAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISSDGKQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLKVTIFRVTEDAGLMSPPMHQHQNVSPIKLLNTPMPQAIVPVKLIRN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1151 423 SMART B3_2 289 385 IPR003340 GO:0003677
Lele34g1151 423 SMART B3_2 6 98 IPR003340 GO:0003677
Lele34g1151 423 ProSiteProfiles B3 DNA-binding domain profile. 289 385 IPR003340 GO:0003677
Lele34g1151 423 SUPERFAMILY DNA-binding pseudobarrel domain 282 384 IPR015300 -
Lele34g1151 423 PANTHER B3 DOMAIN-CONTAINING 3 373 - -
Lele34g1151 423 Gene3D - 1 100 IPR015300 -
Lele34g1151 423 MobiDBLite consensus disorder prediction 224 250 - -
Lele34g1151 423 CDD B3_DNA 287 383 IPR003340 GO:0003677
Lele34g1151 423 MobiDBLite consensus disorder prediction 234 250 - -
Lele34g1151 423 SUPERFAMILY DNA-binding pseudobarrel domain 3 100 IPR015300 -
Lele34g1151 423 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Lele34g1151 423 Pfam B3 DNA binding domain 292 384 IPR003340 GO:0003677
Lele34g1151 423 Pfam B3 DNA binding domain 7 95 IPR003340 GO:0003677
Lele34g1151 423 Gene3D - 266 387 IPR015300 -
Lele34g1151 423 CDD B3_DNA 4 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1151 Lele-ChrLele34 20001521 20004611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1151 1 389 B3 DNA Binding Superfamily AT3G18990 52.141 1.16e-131 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele34g1151 B3 2.2e-15 CL0405