Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1135 ATGCAACCGATAAGCTCTCCAGCATTCTTAGTTCTGAAGGAGGAATCGGAAAAATTCAGGGTGCCTGATTCTCAGCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAGAAGGAGGAAAATGAAACAGAGAAGGAATACCGAGACAAGAAGAATTGGATGAGTTCTGTACAACTCTGGAACACTGATAGTCATCCCGCCTGTGAACAAAAAGAGCATTATAAATTAGTAAACAAGAAAAATGAAGAACACTCTGTGGCAGAGGATCCTTTCAAATCTTGTAGAAATAGAATTGGGAGGGTCTTTATGCCTTTTACAACATACAGTCCAGTTCATGTGACAAGTGTGGCAACCAAGGATGAAAAGGAAGAGTCTGATATCAATGGACTTTCTCTTGTGACTCCTGGAGTTAAAAATCTGAGGGAGGGGTCTGTTTCTAGTGGATCAGGAATAACATCTGGTAGGGCGGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGCACTGGACCGCAGCAGACTGCTCGGAAACAAAGAAGGTGTTGGTCACCAGAGCTCCATCGTCGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCCCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGAGGGCCTGACCAACGACGAAGTGAAGAGCCATTTGCAATATAATGACTCCTCTAAGGGTAGCGTTTCAGGGTCTGGCTCTCCTCAAGGTCCCCTCCAGTTAGCTTCAGGATCTGGAGGACTCAGCAGTTTTTCACGTATGGCTGGTGATCTTATGACATTACTTAGCCTGTGGAATGCAGATTTAAAATCTGCTTGCAGCCTTAAGCTAAAAGGTACCTTCTTTGTGTATACTGTGGTCCATGAGATGAGACTCCTTTGGAAAATTGCTCTGTTCTGA 933 0.4437 MQPISSPAFLVLKEESEKFRVPDSQPVLEEFIPLRKECDQKEENETEKEYRDKKNWMSSVQLWNTDSHPACEQKEHYKLVNKKNEEHSVAEDPFKSCRNRIGRVFMPFTTYSPVHVTSVATKDEKEESDINGLSLVTPGVKNLREGSVSSGSGITSGRAVSSPPCSDQPSLRTGPQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVEGLTNDEVKSHLQYNDSSKGSVSGSGSPQGPLQLASGSGGLSSFSRMAGDLMTLLSLWNADLKSACSLKLKGTFFVYTVVHEMRLLWKIALF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1135 310 MobiDBLite consensus disorder prediction 143 183 - -
Lele34g1135 310 MobiDBLite consensus disorder prediction 142 185 - -
Lele34g1135 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 237 IPR017930 -
Lele34g1135 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 181 231 IPR006447 GO:0003677
Lele34g1135 310 SUPERFAMILY Homeodomain-like 178 232 IPR009057 -
Lele34g1135 310 Gene3D - 180 235 - -
Lele34g1135 310 MobiDBLite consensus disorder prediction 232 253 - -
Lele34g1135 310 Pfam Myb-like DNA-binding domain 183 231 IPR001005 -
Lele34g1135 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 11 231 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1135 Lele-ChrLele34 19881829 19884377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1135 8 231 G2-like Transcription Factor Family AT2G03500 35.745 7.48e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele34g1135 Myb_DNA-binding 1.4e-05 CL0123