Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1129 ATGGGGGTTTGTACGTCCAAGCCGCAAAAGCCGAACCCATTTTCCGTTCAGGAACTAGAAGGCGACCGTGGCTCCTGCGATCCTTCAAGCATCCCGAAAGGCTCACCTACTCCGAAAAATGAGGTCGTTTCAGGGAAGCAGTCTCCGTTCTTCCCATTCTACAGCCCCAGCCCAGCTCGCTTCTTTAAGAAATCTCCGGCGCCTACGGGAGTTCCCCAGAGTGCGAGTTCGACGCCGGGGAGAATTTTCCGGCGTCCCTTCCCTCCGCCGTCGCCGGCGAAACACATAAAGGCTTTCCTAGCTAGAAGGCAGGGAAAGAAGACTTCGACGGCGATACCGGAAGATGGAGAGGAGGTGGATTTGGACAAGAGGTTTGGGTTTTCGAAAGAGTTCACGAGTAGGCTTGAGGTTGGGGGAGAAGTGGGCAGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTTAAGAAGGGCGAGCATAAGGGCCAGCAAGTTGCTGTGAAGGTCATCCCTAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTACGAAGAGAAGTGAAAATATTGCGAGCATTGACTGGACACAACAATCTCATACAATTTTATGATGCATTCGAAGACCAGGATAATGTCTATATTGTTATGGAGTTATGTGAAGGAGGGGAGCTTTTAGATAGGATATTATCAAGAGGAGGGAAATACTCAGAAGAAGATGCAAAGGCTGTCATGGTACAGATACTAAACGTCGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTAAAGCCAGAGAATTTCTTGTATGCTGCGAAGGGTGAGAATTCTGAGTTAAAGGCAATAGACTTTGGATTATCAGACTTTGTCAAACCAGATGAAAGGCTCAATGACATTGTTGGGAGTGCATACTATGTGGCACCTGAAGTTCTACATAGATCTTATAGTATAGAGGCCGATATATGGAGCATAGGTGTAATTGCATATATTCTTTTATGTGGTAGTCGCCCCTTTTGGGCTCGAACGGAGTCTGGCATTTTTCGGGCAGTTTTGAAAGCAGATCCAAGCTTTGATGAAGATCCCTGGCCCTCTTTATCTTTGGAAGCAAAAGATTTTGTCAAGCGTCTATTAAACAAGGATCCGCGGAAGCGACTTTCAGCCGCTCAGGCCTTAAGTCACCCTTGGATACGAAATCACAATAACGTAAAAGTTCCTCTTGATATTCTAATATTTAGGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGGAAGGCTGCTTTAAGGGCCTTATCCAAGACATTGACTGCAGATGAACTTCATTATCTGAGGGAGCAGTTTGCTTTGTTGGAGCCAAACAAAAATGGCAGTATAACCTTGGACAACATTAGGACGGCCCTGATGAAACATGCAACAGATGCCATGAAGGAGTCTCGGATCCCCGATTTTCTTGCCTCGCTAAATGCATTACAATATAGAAGAATAGATTTTGAAGAATTTTGTGCGGCTGCGTTAAGCGTGCATCAGCTCGAAGCTCTAGATCGATGGGAACAACGTTCACGCTGTGCTTATGAACTTTTCGAGAAAGACGGAAACAGGGCTATTATCATTGAAGAACTTGCTTCAGAACTAGGACTTGGTCCTTCTATTCCAGTTCATGTTGTACTACAGGACTGGATAAGGCACACCGATGGGAAGCTAAGCTTTCTCGGGTTCGTCAAATTGTTACATGGTGTATCCAGCCGAAGTCTTGCAAAGGTTCAATAA 1770 0.4565 MGVCTSKPQKPNPFSVQELEGDRGSCDPSSIPKGSPTPKNEVVSGKQSPFFPFYSPSPARFFKKSPAPTGVPQSASSTPGRIFRRPFPPPSPAKHIKAFLARRQGKKTSTAIPEDGEEVDLDKRFGFSKEFTSRLEVGGEVGRGHFGYTCSARFKKGEHKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLIQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYAAKGENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSIEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEDPWPSLSLEAKDFVKRLLNKDPRKRLSAAQALSHPWIRNHNNVKVPLDILIFRLMKAYMRSSSLRKAALRALSKTLTADELHYLREQFALLEPNKNGSITLDNIRTALMKHATDAMKESRIPDFLASLNALQYRRIDFEEFCAAALSVHQLEALDRWEQRSRCAYELFEKDGNRAIIIEELASELGLGPSIPVHVVLQDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1129 589 FunFam CDPK-related kinase 3 127 299 - -
Lele34g1129 589 SUPERFAMILY EF-hand 425 579 IPR011992 -
Lele34g1129 589 FunFam CDPK-related kinase 1 433 506 - -
Lele34g1129 589 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Lele34g1129 589 MobiDBLite consensus disorder prediction 30 44 - -
Lele34g1129 589 MobiDBLite consensus disorder prediction 63 89 - -
Lele34g1129 589 MobiDBLite consensus disorder prediction 1 48 - -
Lele34g1129 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lele34g1129 589 SMART serkin_6 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1129 589 FunFam Calcium-dependent protein kinase SK5 307 402 - -
Lele34g1129 589 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
Lele34g1129 589 FunFam CDPK-related kinase 1 128 223 - -
Lele34g1129 589 Gene3D - 421 579 - -
Lele34g1129 589 Gene3D Phosphorylase Kinase; domain 1 137 224 - -
Lele34g1129 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 564 - -
Lele34g1129 589 SUPERFAMILY Protein kinase-like (PK-like) 131 432 IPR011009 -
Lele34g1129 589 CDD STKc_CAMK 136 396 - -
Lele34g1129 589 Pfam Protein kinase domain 137 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1129 589 ProSiteProfiles Protein kinase domain profile. 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1129 589 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1129 Lele-ChrLele34 19846015 19851418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1129 1 585 EF-hand Containing Proteins AT3G50530 72.468 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele34g1129 Pkinase 1e-70 CL0016