Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1112 ATGTCCTCCAACACACCATCCAGGCTCCTCCCACCTTCCTCCTCCACCCCCTCCTCTCTTCCGCCGCCCAACTCCCTCACTCCCGACCAAGAACTCTCTGTCATCGTCGCCGCACTCACCAACGTCGTCCTTGGCTCCACCGCCGATCTCACCCACCAGTTCAACTTACCCCATTCCTCCGCCGCCGGAAACATCGCCCACAATGCCAACCGCACGGCGCCAGCCCTGAATGTTGGAGCCGGCCGCCCTGGTTTAGGATTCGCTTCCTACTCTGACCGCAAGTTTTTACCAGAAGAGAAGACCAAGAATGGCGGGAACAAACAGCCGCAGAAGAGGGCGAAGAAGAAGTACCGGGGAGTTAGGCAGAGGCCATGGGGGAAATGGGCGGCGGAGATTCGTGACCCGAGACGGGCGACCCGGGTCTGGCTGGGAACCTTCAAGACGGCCGAGGAAGCGGCTCGCGCGTACGATGACGCGGCCATCAAGTTCCGTGGGCCCCGCGCCAAGCTGAATTTTCCTTTCTCTGACGACTCGTTGCTGAATTTGCAGGTCCGTCCACCCCCGGAAGCTCCTTCAACGGCGACGCCGCTGGAGACAGAGGCGCCGGAGGAGGAGCAGGGGAATACCGAAAATCTGAACTGTGGAACGGCAGCGATGGTGTCTGAGGATGGTGAATTCTGGGATAGGATTGCAAAAGCAGATTTAGAACAGTGGTGGATGGATTTTGCTGCCGGAGACTCTTTGGATTCTGCTACCGGAACTACTCAGGGGGTGAATTCTTAA 783 0.5875 MSSNTPSRLLPPSSSTPSSLPPPNSLTPDQELSVIVAALTNVVLGSTADLTHQFNLPHSSAAGNIAHNANRTAPALNVGAGRPGLGFASYSDRKFLPEEKTKNGGNKQPQKRAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFKTAEEAARAYDDAAIKFRGPRAKLNFPFSDDSLLNLQVRPPPEAPSTATPLETEAPEEEQGNTENLNCGTAAMVSEDGEFWDRIAKADLEQWWMDFAAGDSLDSATGTTQGVNS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1112 260 PANTHER DNA-BINDING DOMAIN 99 198 IPR044808 GO:0003700|GO:0009873
Lele34g1112 260 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Lele34g1112 260 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Lele34g1112 260 MobiDBLite consensus disorder prediction 96 120 - -
Lele34g1112 260 Gene3D AP2/ERF domain 115 174 IPR036955 GO:0003700|GO:0006355
Lele34g1112 260 MobiDBLite consensus disorder prediction 1 27 - -
Lele34g1112 260 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
Lele34g1112 260 SUPERFAMILY DNA-binding domain 116 175 IPR016177 GO:0003677
Lele34g1112 260 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Lele34g1112 260 CDD AP2 115 173 IPR001471 GO:0003700|GO:0006355
Lele34g1112 260 MobiDBLite consensus disorder prediction 183 210 - -
Lele34g1112 260 FunFam Ethylene-responsive transcription factor 2 115 174 - -
Lele34g1112 260 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1112 Lele-ChrLele34 19751654 19752436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1112 111 173 AP2-EREBP Transcription Factor Family AT2G47520 78.125 1.47e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele34g1112 AP2 2.3e-15 CL0081