Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1098 ATGGATCGCAAAAGACCATATTATAAGCCAGAAAAGACTTTGTCACCTGATTTTGCTGCTGCTTTTGCAGATTACCCTTTGGATTTCAGTGTTTCTGTTGCTTGTTTTGCAAATGTAACAAGAAGCCTTGGAGTCACCCTAAATGCTTCTGATCTCTGTCTTCAGACCATATCTCAGACCTTGAAACATTATGGAATTACACGAAATGCGACAATTTTCTGTGGTTTTGGCCCAAAGATCTCAGTCAATTATGAGTGTGAGGGTCGAACTACTGTTGGGCAAATGCGCAGGTTGTGGAAAATTGTAAAGGGCCACTTGCTGAGGAAAGATGGCAAGGATCAAATTCTTAACCGCTTAAGAGTATCAGCTTCAGAGCCATCCCCATCCTTGCCAACTCCTGAAGCTTCTCCTAGTCCACTTGTTGCTGATATCCCAAGCCAGTCACTGTTAGGTGTACCACTGAAGGGAAAGCATCATTCATACTACTTGACAATAATTCCTGTTATTGGTATTTCCGTCACAGTTGTTGCTGCTATCATGCTCTTGGTCTTGATTGTTCTAATTCGTCAGAAAAAAAGAGAACTAGGGGTGCCTGATAATTTTAGTAAAGCCTCTTCAAAAGCTACACCTTCTTGTGCAATGTGGAAATTTCAGGAAGCATTAAAGAGAATGAACAAAGTTTCAGAGCAAGGGGAGGATGAATTTTGCAGAGAAATAGAGCTTCTTGCTCAGTTGCATCATCGGCATCTTGTAGCATTACGAGCCCCTGGTAAAGCACCTCTAAGTTGCCGAACGAGAATCCAAATCGCCATTGATGTGGCTGATGCACTGGAGTATCTCCATTTCTATTGTGATCCTCCTCTATGGCACAGAGACAAAAAATCTAGCAACATTTTACTGTATGAGAATTTTGTTGCTAAGTTAGCCGATTTCGGTCTTGCACATGCTTCAAAAGATGGCTCCATATGCTTCGAAGCTGCAAACACCAATATCATGGGAACTCCAGGTTATATGGATCCTAAATATGTGGTTACTCATGAGCTGACGGAGAAAAGTGATATTTGCAGTTATGGAGTATTACTGTTAGAAATCGTGACCGGAAGGCGAGCGATTCAAGATAATAAAAATTTGGTTGAATGGCCACAGCCATACATGGGACCGGATTCTGTAACGCGATCGATGGAACTAGTGGATCCAAGTGTAAGGGAGACAAGGCCTTCCATGAAACAAGTCCTTAGGCTTCTGTATGAGACATCAGAACCTATGCACAGTGGGTTTCTTGAAGATGTTGAAGATGAAGAAGAATGTGAAGGGAATGAGCAGAGTTGCAGAAGAAGCAGAGGTCAAATACACAGAACTGAAGCATTATTTCAGAGTGGGGATGGAAGATATCTTGCTTTTTCTTCAAGTACATCGAGGTCTTATTGCAGCAGAAGCTTTTGA 1443 0.42 MDRKRPYYKPEKTLSPDFAAAFADYPLDFSVSVACFANVTRSLGVTLNASDLCLQTISQTLKHYGITRNATIFCGFGPKISVNYECEGRTTVGQMRRLWKIVKGHLLRKDGKDQILNRLRVSASEPSPSLPTPEASPSPLVADIPSQSLLGVPLKGKHHSYYLTIIPVIGISVTVVAAIMLLVLIVLIRQKKRELGVPDNFSKASSKATPSCAMWKFQEALKRMNKVSEQGEDEFCREIELLAQLHHRHLVALRAPGKAPLSCRTRIQIAIDVADALEYLHFYCDPPLWHRDKKSSNILLYENFVAKLADFGLAHASKDGSICFEAANTNIMGTPGYMDPKYVVTHELTEKSDICSYGVLLLEIVTGRRAIQDNKNLVEWPQPYMGPDSVTRSMELVDPSVRETRPSMKQVLRLLYETSEPMHSGFLEDVEDEEECEGNEQSCRRSRGQIHRTEALFQSGDGRYLAFSSSTSRSYCSRSF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1098 480 PANTHER OS01G0750732 PROTEIN 220 443 - -
Lele34g1098 480 ProSiteProfiles Protein kinase domain profile. 161 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1098 480 SUPERFAMILY Protein kinase-like (PK-like) 218 417 IPR011009 -
Lele34g1098 480 Gene3D Phosphorylase Kinase; domain 1 214 253 - -
Lele34g1098 480 Pfam Protein kinase domain 264 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1098 480 Gene3D Transferase(Phosphotransferase) domain 1 254 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1098 Lele-ChrLele34 19690664 19693810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1098 30 95 Receptor kinase-like Gene Family AT3G19300 59.091 1.86e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lele34g1098 Pkinase 5.2e-20 CL0016