Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1095 ATGCCTGAAGAGAAAGAAGCTCCAAAGCAGCACCAGATGGGGTCATGGGGTCTCTCGATTCCTGACGAGAAATTTTCAAACATCAATGTACCACGGATCATAGGAAGCTCTTCCAACAATAATGACCCTCTCATTGCTGATCATAACCAACAAGTCGACGACGGAGTTAATGCTGAAGGTGGTGATAAGGCGACGTCGTCGAGGACAATCCGAGAAGGAAGGAAGAGGACTACTGGTAAGACCACCGGTGGAGGGTTGAAAGGTGGGAACGGAGCTGGGGGTGGTGAAGACGCCGATGATCACGAGATGCACATATGGACAGAGAGAGAAAGGAGGAGGAAGATGAGAAACATGTTCGCCAACCTTCATGCTCTGCTTCCTCAGCTTCCTCCTAAGGCTGACAAATCAACCATTGTTGATGAAGCGGTGAGGTACATCAAAAGCCTGGAGATCACTCTGGAGAATCTGGAAAAGAAAAAACAGGAAAGGCTGATGAAGCAAGCCCAGCAGTCTTCTGATTCAAGCTTCACCGTTGTGTATGAACCTTCTTATGTGAAGAATATCAACTCTCAGAGGCATCCCTATTTGTCAAGGGAGGCATTCATGGCTGATCATGGTGGCTCTTCCAATCATAACTCAAGCCCTAATAATAACAACTTGGCCTCCACCACAAAAGCCATTACCATTGGGACTTCACCTTCACTATCACTTCCGGGAACTGTGAATAACCCATTAGTAGGGTTTCAGACTTGGAGCTCTTCAAATGTTGTCGTCAACATTTGTGGTGATCAGGCTCAGTTCAACGTGTGCTCCCTCAAGAGTCCAGGCCTCTTCACCAGCATATGTACTGCGTTTGAGAAGTACAAGATCGAGATTTTATCTGCTCATGTTTCATCTGATGATGCTCGATGCTTTTACATGATCCATGCCCAGGTAAATGGAGGTTCAAATCAGGCATTCACAGCGGAGGAAGCTTTCAAGCAAGCAGCTGGAGAAATGACGCTGTGGCTATCTTAA 1017 0.468 MPEEKEAPKQHQMGSWGLSIPDEKFSNINVPRIIGSSSNNNDPLIADHNQQVDDGVNAEGGDKATSSRTIREGRKRTTGKTTGGGLKGGNGAGGGEDADDHEMHIWTERERRRKMRNMFANLHALLPQLPPKADKSTIVDEAVRYIKSLEITLENLEKKKQERLMKQAQQSSDSSFTVVYEPSYVKNINSQRHPYLSREAFMADHGGSSNHNSSPNNNNLASTTKAITIGTSPSLSLPGTVNNPLVGFQTWSSSNVVVNICGDQAQFNVCSLKSPGLFTSICTAFEKYKIEILSAHVSSDDARCFYMIHAQVNGGSNQAFTAEEAFKQAAGEMTLWLS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1095 338 Pfam Helix-loop-helix DNA-binding domain 104 150 IPR011598 GO:0046983
Lele34g1095 338 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 8 337 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele34g1095 338 CDD bHLH_AtbHLH_like 104 157 IPR045239 -
Lele34g1095 338 MobiDBLite consensus disorder prediction 51 99 - -
Lele34g1095 338 Gene3D - 95 168 IPR036638 GO:0046983
Lele34g1095 338 MobiDBLite consensus disorder prediction 1 21 - -
Lele34g1095 338 Coils Coil 139 166 - -
Lele34g1095 338 SMART finulus 107 155 IPR011598 GO:0046983
Lele34g1095 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 101 169 IPR036638 GO:0046983
Lele34g1095 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 99 149 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1095 Lele-ChrLele34 19666566 19669806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1095 69 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 40.956 2.81e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele34g1095 HLH 1.3e-10 No_clan