Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1093 ATGGCCCAACCGCAGCAACCAATCGAACAGGTTCAGTGCTTCGGCCGCAAGAAGACCACCGTTGCCGTCACTTACTGCAAACGCGGTCGTGGTCTCATCAAGATCAATGGCTGCCCCATCGAACTTGTGCAGCCGGAGATCCTCCGATTCAAGGCTTTCGAACCCATCCTCCTTCTGGGCAAACACCGTTTCGCCGGCGTTGACATGCGGATCCGCGTAAAAGGCGGTGGTCACACCTCTCAGATATATGCTATTCGCCAGAGTATAGCCAAAGCTCTCGTCGCTTTCTACCAGAAATACGTCGATGAACAGAGCAAGAAGGAGATCAAGGACATTCTGGTCAGGTATGATCGAACACTCCTTGTCGCTGATCCAAGGCGCTGCGAACCCAAGAAGTTCGGTGGTCGTGGCGCTCGTGCTAGGTTCCAGAAATCATACCGTTGA 444 0.536 MAQPQQPIEQVQCFGRKKTTVAVTYCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1093 147 Pfam Ribosomal protein S9/S16 15 147 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele34g1093 147 ProSitePatterns Ribosomal protein S9 signature. 75 93 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lele34g1093 147 Gene3D - 2 147 IPR014721 -
Lele34g1093 147 PANTHER RIBOSOMAL PROTEIN S9 6 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele34g1093 147 SUPERFAMILY Ribosomal protein S5 domain 2-like 10 147 IPR020568 -
Lele34g1093 147 FunFam 40S ribosomal protein S16 3 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1093 Lele-ChrLele34 19647068 19647511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1093 5 147 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.811 4.07e-93 264