Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1086 ATGATCTCACTCGACCCTAACTTTCATCACTCACAAATCACAGTTTCCTGTCTCTGGAAGCTGAAGATGGGTAACATCTCTGTGTGTGTTCTATTATGGATATTTGCTAGTGCTTTCCTGACTCATTCTTCATATTCTCATGAGCTGACCGGCTCCAAAAGAGAAGCTTTAGAAATTATCATAGGCGGCGGCGGCTTCAACAATACTGCTCATGCTCCTTCTTCCCCAGAATGTGGAGAATGTCAAGCTCCTCCCCCTCCTCCTCCACCTTCATTCTCTCCGCCTCCTCCACCACCACCATGCCCGCCTCCTCTTCCTCCTCCTCCGCCACCTCCTCCTCCACCTTCATGCTCTCCGCCTCCTCCACCACCACCATGCCCGCCTCCTCCACCACCTCCTCCTCCACGTCCTGTACCGCCGCAAGAGGGAACCAGGCTGAAGAACGCGAAAAAAGTGCTTCTAAAATTCAAGCAGACCATCAGCGACCCAAAAGGGCAAACGTCAAACTGGAAGAAGTCCATCTACGTATGTAATTTCAACGGCATCCGTTGCGCCAAATATCCGAACGAAAAACAGAAAGCAGTCGCCGGACTGGACTTCAACGGATACGCATTCTCCGGCCTGAAGGAACATAAACCGCTGGACCTTTTCGGAAGCTTGGCCATGATCCCAGAGTTAGCATTCTTCCACGTGAACTCCAACAATTTCACCGGCCAAGTCCCACCTCAAATCTCCAACTTCTCATTTTTCTACGAGCTCGATCTCAGCAACAACAAGATATCCGGCGAGTTCCCAAAAGAGGTCCTTCAATCGAAACAACTGTTGTTCCTGGATCTCAGGTTCAACGAACTTTGCGGCTCGATTCCACCACAGCTCTTCAAGTTGCAACTAGACGTCATCTTCATCAACAACAACCAGCTCACCGGGAGCCTTCCTGATGAATTAGGGTGCACGCCGGCCAGGTATCTCACATTCGCCAAAAACCAGTTAACCGGCCCAATCCCCAAGAGCATCGGTAAAGCCACAAACATCACGGAAGTGCTGTTCTTGGGGAATCAGTTTTCTGGTTGTTTACCTTATGAGATCGGGTTCCTGGTAAACGCTACGGTTTTTGATGTGAGCAAGAATTGGTTGACTGGTCCGATCCCACCCTCGTTTGCCTGCTTAGATAACATTCAGTTCTTGAATTTGGCTGATAATCAATTCTACGGGCCCGTTCCGGAGTCGGTGTGCGAACTTCCGGAGCTCCAAAAGGGTAGTGGGAATTTGACGCTGTCGGGTAATTATTTTACCCAGGTGGGACCCGAATGCAGGAAGCTGATAGACAAGAAAGTGCTGGATGTGAGCCGAAATTGCATTCTGGGACTTCACGACCAGAGAACACCAGATGAGTGCACCAAGTTTTTCTCCAAGGTTAAACCATGTCCCAACCCCAAGACTCTGAACATCGTACCTTGTAACAAGAACTATGAGAGCTACAAGGGGATGGAGCCTGCCGGACCAGCAGCAGCAGGTTCACCGCCGACTCCGGTGACCTACAAGTCCCTCAAACCGCACCGCTTGTGA 1566 0.5045 MISLDPNFHHSQITVSCLWKLKMGNISVCVLLWIFASAFLTHSSYSHELTGSKREALEIIIGGGGFNNTAHAPSSPECGECQAPPPPPPPSFSPPPPPPPCPPPLPPPPPPPPPPSCSPPPPPPPCPPPPPPPPPRPVPPQEGTRLKNAKKVLLKFKQTISDPKGQTSNWKKSIYVCNFNGIRCAKYPNEKQKAVAGLDFNGYAFSGLKEHKPLDLFGSLAMIPELAFFHVNSNNFTGQVPPQISNFSFFYELDLSNNKISGEFPKEVLQSKQLLFLDLRFNELCGSIPPQLFKLQLDVIFINNNQLTGSLPDELGCTPARYLTFAKNQLTGPIPKSIGKATNITEVLFLGNQFSGCLPYEIGFLVNATVFDVSKNWLTGPIPPSFACLDNIQFLNLADNQFYGPVPESVCELPELQKGSGNLTLSGNYFTQVGPECRKLIDKKVLDVSRNCILGLHDQRTPDECTKFFSKVKPCPNPKTLNIVPCNKNYESYKGMEPAGPAAAGSPPTPVTYKSLKPHRL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1086 521 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 142 503 - -
Lele34g1086 521 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 218 311 - -
Lele34g1086 521 MobiDBLite consensus disorder prediction 498 521 - -
Lele34g1086 521 Gene3D Ribonuclease Inhibitor 318 492 IPR032675 -
Lele34g1086 521 SUPERFAMILY L domain-like 149 455 - -
Lele34g1086 521 Pfam Leucine rich repeat N-terminal domain 148 184 IPR013210 -
Lele34g1086 521 MobiDBLite consensus disorder prediction 110 143 - -
Lele34g1086 521 MobiDBLite consensus disorder prediction 71 98 - -
Lele34g1086 521 PRINTS Proline rich extensin signature 121 137 - -
Lele34g1086 521 PRINTS Proline rich extensin signature 87 99 - -
Lele34g1086 521 PRINTS Proline rich extensin signature 99 120 - -
Lele34g1086 521 Gene3D Ribonuclease Inhibitor 147 317 IPR032675 -
Lele34g1086 521 MobiDBLite consensus disorder prediction 110 141 - -
Lele34g1086 521 MobiDBLite consensus disorder prediction 79 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1086 Lele-ChrLele34 19615947 19617512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1086 144 479 Trihelix Transcription Factor Family AT4G33970 40.233 9.71e-76 251