Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1076 ATGAATACAGATTCGGCAATAGTGGAGGCGCAGCAGAGAGGCGTGGATCGGGTCAAGGGACCATGGAGTCCCGAGGAGGATGAGTTGTTGCGCAAGCTCGTGCAACGGTACGGCCCGCGGAATTGGTCCGCCATAAGCAAATCAATAGCCGGCAGGTCAGGGAAGTCTTGTCGTCTGCGGTGGTGCAACCAGCTCTCGCCGGACGTGGAGCATCGGTCCTTCACACCGGAGGAAGACGAGATCATCATCAACGCCCACTCAAAGTTCGGCAACAAGTGGGCCACCATAGCGAAGCTTCTGAACGGCCGTACGGACAACGCGATCAAAAACCATTGGAACTCGACCTTGAAGCGCAAGTACTCATCGTTGATCACCGATGAAGGAGCCGCAATCGATGGGCCTCCGGAAAAGAAATTAGCCATTGTGGAACGCGCTATGCTGATACAGTCATTGCCGCCGGGCGGCCATTGTTACAGCCCAAGCAGTCCATCTGGATCTGATGTTAGTGATTCAGGTCTTCCCGGGGTTTCACCTTCGATGGCGATTCGTCCTGTAGCAAGAAACTGCGCAATCTTGTCTCCTTCCCAGCAGGTCGAGTCGCGCCCTAGTCCAATCTTCAACTTAAACAGAGAGCCCTGCACTGATCTTAGTCTATCCCCTCTGGGAGCCGAGTTGAAGGTGTCGCAGAAGATTCATAGTCCTGGTTCTATGGCCGAGGTACCTACGCAGTCTGAGAAGTTGTCGTCAATGGCGACATTTGGGCCTGATTTACTGATGGTGATGAAGGAAATGATAAGGGAGGAAGTGAGAAATTACATGGAGGGACATATATATGATAGATTGTGCTCTAATCCTGACGGTGTGAGTGCTGGAGTTTCAAAGACTGTACAGATGAGGACGGTGGAAATATCAGGGAAAGTTGGTAGAGTTTTAAGTTTGGAGTCATGA 948 0.5179 MNTDSAIVEAQQRGVDRVKGPWSPEEDELLRKLVQRYGPRNWSAISKSIAGRSGKSCRLRWCNQLSPDVEHRSFTPEEDEIIINAHSKFGNKWATIAKLLNGRTDNAIKNHWNSTLKRKYSSLITDEGAAIDGPPEKKLAIVERAMLIQSLPPGGHCYSPSSPSGSDVSDSGLPGVSPSMAIRPVARNCAILSPSQQVESRPSPIFNLNREPCTDLSLSPLGAELKVSQKIHSPGSMAEVPTQSEKLSSMATFGPDLLMVMKEMIREEVRNYMEGHIYDRLCSNPDGVSAGVSKTVQMRTVEISGKVGRVLSLES 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1076 315 Gene3D - 18 70 - -
Lele34g1076 315 FunFam MYB transcription factor 19 70 - -
Lele34g1076 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Lele34g1076 315 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Lele34g1076 315 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
Lele34g1076 315 SMART sant 70 118 IPR001005 -
Lele34g1076 315 SMART sant 18 67 IPR001005 -
Lele34g1076 315 ProSiteProfiles Myb-like domain profile. 14 65 IPR001005 -
Lele34g1076 315 MobiDBLite consensus disorder prediction 153 175 - -
Lele34g1076 315 PANTHER MYB PROTEIN-RELATED 19 203 - -
Lele34g1076 315 MobiDBLite consensus disorder prediction 155 173 - -
Lele34g1076 315 FunFam Transcription factor MYB44 73 119 - -
Lele34g1076 315 CDD SANT 21 63 IPR001005 -
Lele34g1076 315 Gene3D - 73 119 - -
Lele34g1076 315 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lele34g1076 315 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele34g1076 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 120 IPR017930 -
Lele34g1076 315 CDD SANT 73 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1076 Lele-ChrLele34 19557033 19558100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1076 15 273 MYB Transcription Factor Family AT5G67300 46.643 6.09e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele34g1076 Myb_DNA-binding 5.3e-17 CL0123