Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1051 ATGAGCTGCAACGGTTGTCGTGTGCTCAGAAAAGGTTGTAGCGATGACTGCATGCTCCGAGATTGCCTTCTCGGCATAGAAAGCCCACAAGCCCAAGCCCACGCCACCGTCTTCGTCGCTAAATTCTTCGGCCGCGCCGCTCTCATGTCCTTCGTCTCCGCCGTGCCCTCTCACCAGAGATCCGCTTTGTTTCGATCGCTTTTGTTTGAGGATGATCCAAGTTACCAGAAGAGTTACTTACCTACCACCATGTGTAGCCTTATAATGCTAATTAGGCATGAGGGCGAAAATGTAAAGTGGGGGACAGGGAGAGAGATGCTGTCATATATTGTAATGGAGGAATTGAGGCATGACATCAGAGTCTCTTTATGGATACGTGGGAACTGGAGGCACAACATGGGACACAACACACAAGAATGTCCCCTGACCCTTTACTCCCTCCAAGAGCCATCTTCATCTTCAACCTCAACGAGAATGCTCTTTTCCTACCAATGGCCTTGTGGCATGTAA 510 0.4961 MSCNGCRVLRKGCSDDCMLRDCLLGIESPQAQAHATVFVAKFFGRAALMSFVSAVPSHQRSALFRSLLFEDDPSYQKSYLPTTMCSLIMLIRHEGENVKWGTGREMLSYIVMEELRHDIRVSLWIRGNWRHNMGHNTQECPLTLYSLQEPSSSSTSTRMLFSYQWPCGM 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1051 169 Pfam Lateral organ boundaries (LOB) domain 2 73 IPR004883 -
Lele34g1051 169 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lele34g1051 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1051 Lele-ChrLele34 19404592 19406395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1051 1 70 AS2 family AT3G49940 75.714 1.72e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele34g1051 LOB 9.6e-16 No_clan