Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1038 ATGGCCAGTTTCGTAGGAACAACACAGAAATGCACCGTCTGTGACAAAACCGCCTACCCCGTCGACCGGTTGACCGCCGACAGCCGTGTTTACCATAAGGCTTGCTTCCGATGCCACCATTGCCGGAATACCCTCAAGAGGGCCGACCCGTGTGTGGTGAGCTTTCGCCGACCCCTCTGCCTCCATGTCTTCTTCAATTTCTCCGATCCGTCTCCTCTATCTGTGCTCAGCTTTCACCGACCTATGCGCTTGCCTCCATTGTCGAGCACTGTGTGTGCTGCCTTCGCTGGTTCTATTGCTGTCATGCCATCGTTCTGCTTCTATCTGGACCTCCGTCGTGATGGGTGCTGTCAGCTGGAGGGGAGATGGCCGACGAGAACACCAAAGATTCAAAAACCTGAAAAACAATCGGAGAATGAGAGTGCAAAGGTTCTCTCAAATGTGTTCCTGGGCACCAAAGACAAGTGCGCAGATAACAGTGAATGGGACTCCATATCACAAAGGTTGCTTCAAGTGCAGCCATGGCGGCTAAAAAGTTTGGTGATTATTGAACAGGAAAACGAGGATAATGTAGAAGGAGGGGGACAACTTTTTGATGGAGAACAAGGTTGTAACGATGACTGTACCTCGTTATGTGAAACAGAAAGCTCGCTAGTTTCAATGGATTCTTCTCCAACATGGCATGAAAATGCTTCATGTTCATCTTCTCGCGAGTTTGTTTCTGAACTTGATGTGGATCAGCAGCTTGCAGGGGATGATGTTACTCCGATGAGTCTTTCATCAGAGAAAGAGGAGAAGAATCAAGATCCACAGAAAGTGCTTGAAAAGCTTAACTTTCAGCTGTTAGATAAAAACGGAAGGGCGATGCCAATACAAGTGAAATACAGGACTTCTTTCGAGAAGAAGAAGAAGAAAGGTAGAAAGGAGTCACTTTCCTCACTCAACTGTTGA 951 0.4763 MASFVGTTQKCTVCDKTAYPVDRLTADSRVYHKACFRCHHCRNTLKRADPCVVSFRRPLCLHVFFNFSDPSPLSVLSFHRPMRLPPLSSTVCAAFAGSIAVMPSFCFYLDLRRDGCCQLEGRWPTRTPKIQKPEKQSENESAKVLSNVFLGTKDKCADNSEWDSISQRLLQVQPWRLKSLVIIEQENEDNVEGGGQLFDGEQGCNDDCTSLCETESSLVSMDSSPTWHENASCSSSREFVSELDVDQQLAGDDVTPMSLSSEKEEKNQDPQKVLEKLNFQLLDKNGRAMPIQVKYRTSFEKKKKKGRKESLSSLNC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1038 316 Gene3D Cysteine Rich Protein 1 67 - -
Lele34g1038 316 PANTHER OS06G0237300 PROTEIN 6 46 IPR045268 -
Lele34g1038 316 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 36 - -
Lele34g1038 316 ProSiteProfiles LIM domain profile. 9 70 IPR001781 -
Lele34g1038 316 ProSitePatterns LIM zinc-binding domain signature. 11 45 IPR001781 -
Lele34g1038 316 SMART lim_4 10 63 IPR001781 -
Lele34g1038 316 Pfam LIM domain 11 66 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1038 Lele-ChrLele34 19316671 19319955 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele34g1038 LIM 2.9e-07 CL0167