Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele34g1033 | ATGAGGTCAAATCCTCGCAACGACGAGGGCCCAGATGGAACCCGACCCTCTGCTAACGCCGCCGGCATCTCCGTCCCAGTAAGCCATCGCAAGAAAGGCACCGGTGTCAGAGCATGGCTCCTAATTGACGCCACTGGCCAGACACAAGTGGTGGAGGCCGGCAAGCACGCCATCATGCGCCGGACGGGCCTGCCCGCCCGAGACCTTCGGATATTGGATCCGCTTCTGTCCTATCCTTCCACGATCCTGGGGCGTGAGAGAGCGATCGTCATTAGTTTGGAGCACATAAAAGCGATAATCACTGCTCATGAAGTTCTGTTGTTGAATTCGAGGGACCCATCCGTCACCCCCTTTGTTGAGGAGTTTCAGAGAAGAATTCTACATCATCATCAAGCCACTAAGGCTCAGGAGGGAAATGGCGATGATTCAAACTGGACAAAATTGTACGATTTGGAAATGCTACAATCTAGGACTGTTAGCCCTCGTACCCAAGATGAGGAAAGTAAAGGAGAAGAGAAACAATTCCAGAATAAAGACGGGATGAAGGTTCTCCCATTTGAGTTTGTAGCACTGGAGGCATGCCTTGAGGCTGCTTGTGGAGTGTTAGAAAATGAAGCAAAGACATTGGAGCAAGAGGCTCATCCTGCCTTAGATAAGTTGACTTCAAAGATTAGTACTCTCAACTTGGAACGTGTTCGTCAAATTAAGAGCCGCTTGGTTGCAATTACTGGTCGAGTTCAAAAGGTACGGGATGAGTTAGAACACTTGCTAGATGATGATGAAGACATGGCTGAGATGTATCTGACAGACAAGTTAGTTCAACAGCAGCTTGAGGATTCTTCAGCTTCATCCATGAATGATAAAGATGACATGGAAGATCAAGAACTTCAAACTGATATGGATGGCAGGATACCTGATGAAATATCATTGGAAGCTGGTGGTGGTTTTGCTCGCTATGAGGATCATCAAAATGCAGTTGGCAGGGGCAGCCGTGGAACTCGTACTAGCACTACCCACAGTACTGTAACCAAGCAACTTGATGTAGAGGAGCTTGAGATGCTCTTGGAAGCATACTTCGTGCAAATTGATGGCACACTGAACAAACTATCCACGCTGAGGGAGTACGTGGATGACACAGAGGACTACATCAACATTATGTTGGATGACAAGCAGAACCATCTGTTGCAGATGGGAGTGATGCTGACAACGGCAACCCTAGTAGTGAGTGCTTTCGTGGTGGTGGCTGGTATTTTTGGGATGAACATTCATATTGATCTTTTTGACGCTAGCATGCATGAATTCCTCTGGACCGTTGGTGGCAGCACCGCTGGCACAGTATTCTTGTACGTGTTTGCCATTGCCTGGTGTAAACACAAACGCCTGCTGGAGTGA | 1392 | 0.4806 | MRSNPRNDEGPDGTRPSANAAGISVPVSHRKKGTGVRAWLLIDATGQTQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTILGRERAIVISLEHIKAIITAHEVLLLNSRDPSVTPFVEEFQRRILHHHQATKAQEGNGDDSNWTKLYDLEMLQSRTVSPRTQDEESKGEEKQFQNKDGMKVLPFEFVALEACLEAACGVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLVQQQLEDSSASSMNDKDDMEDQELQTDMDGRIPDEISLEAGGGFARYEDHQNAVGRGSRGTRTSTTHSTVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIDLFDASMHEFLWTVGGSTAGTVFLYVFAIAWCKHKRLLE | 463 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele34g1033 | 463 | Gene3D | Magnesium transport protein CorA, transmembrane region | 151 | 394 | - | - | |
| Lele34g1033 | 463 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
| Lele34g1033 | 463 | Gene3D | - | 26 | 110 | - | - | |
| Lele34g1033 | 463 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 26 | 462 | IPR039204 | - | |
| Lele34g1033 | 463 | CDD | Mrs2_Mfm1p-like | 39 | 461 | IPR039204 | - | |
| Lele34g1033 | 463 | Coils | Coil | 192 | 212 | - | - | |
| Lele34g1033 | 463 | MobiDBLite | consensus disorder prediction | 162 | 176 | - | - | |
| Lele34g1033 | 463 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Lele34g1033 | 463 | FunFam | Magnesium transporter MRS2-1 | 27 | 110 | - | - | |
| Lele34g1033 | 463 | Pfam | CorA-like Mg2+ transporter protein | 350 | 453 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele34g1033 | Lele-ChrLele34 | 19275763 | 19278358 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele34g1033 | 39 | 463 | MRS2 Gene Family | AT3G19640 | 68.337 | 0.0 | 570 |