Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1032 ATGAGGTTCTTCATCTTCATCGTCTTTCTTCTTCTGGTCGTCCCTTCCAACGCTGCAATATCTTCTTCTTCTCAACTGGTTCAGACCCTCCCTGGTTTTCCTGGAAAACTCCCTTTCACACTTGAAACTGGGTACGTGGGAGTTGGCGACTCAGAGAGCGTTCAGCTATTTTACTACTTCGTTGAATCTGGGAGGGATCCTGATGAAGATCCTCTCGTGCTCTGGCTCACCGGCGGTCCTGGTTGTTCTGGTTTCTCCGGCCTCATCTTTGAAGTTGGTCCCCTGTTATTTGATTATGCCAAGTCTAGTAGCGGGAAAGTGAAAGTTCCAGTGCTGAAGTTGAATCCATACTCATGGACTAAGGTATCTAACATGATATTCATCGATGCCCCCGTTGGCACTGGGTTCTCCTATGCAACAAACTCGGAGGCATATGAAGTCGATGATATATTATCCGCTACACAGACCTATGAATTTCTCAGGAAGTGGCTTTTGGCTCATCCCCGGTTCCTAAAACATCCTCTGTACATCTCTGGTGATTCATATTCAGGCATCATTATCCCTATCCTTGTCAAGAAGATCTCTGACGATAATGATGCAGGTATAGAACCACGAATGAATCTAAAGGGTTATTCTATTGGAAATCCAGTTACGGATGAAGTAGTTGATAAGAACTGGAGAGTTCCATTTGCACACAGATTAGGACTTATACCAGATAAACTTTATGAGTCAACCAAAAGGGATTGCCAGGGTGAATATGTGGATGTAGATCCAAGCAACGCTGCATGTTTAGGGGATCTTGAAGCTGTTACGGACTGCACCAAGATGTTAATGATTGCAGACATATTAGAGCCTAACTGTGCTGCAGACTCGCCAAAATCAGGATTACTCGAAAGGAATCCTAATATTGTCAAAGAGGATTCCCTGGAGCTTCTTTCTACCCCTGAGCATTCTGGACCATGGTGTCGGGCATATAACTATGTCTTCTCTTACGTTTGGGCTAATGACGAAGAAGTTCAGGCTGCCCTCCACATTCGGAAGGGAACGAAGGAGGAGTGGTCGAGATGCAATAGAAGTTTGGCTTACACAAAGGATGTCACATGCAGTGTCCCATTCCACAAGAGCCTTACAAGCAAAGCCTACAAAGTTCTGATCTACAGTGGAGATCATGACATGGCTGTCCCATGCGTGGGTACCATGGCATGGGTAAAGTCTCTGGACTTGACAGAAAGTAGCAAATGGAGACCCTGGTATGTCCAAGGCCAAGTCGGAGGATACACAGTGGCGTATGCACACAACAATTACAGCTTAACATATGCGACAGTGAAGGGAGCGGGACATACGGCACCAGAGTACAATCCTATACAATGCTTGGCTATGTTTTCTAGGTGGCTTGCTCGTTACCCTCTCTAA 1413 0.4572 MRFFIFIVFLLLVVPSNAAISSSSQLVQTLPGFPGKLPFTLETGYVGVGDSESVQLFYYFVESGRDPDEDPLVLWLTGGPGCSGFSGLIFEVGPLLFDYAKSSSGKVKVPVLKLNPYSWTKVSNMIFIDAPVGTGFSYATNSEAYEVDDILSATQTYEFLRKWLLAHPRFLKHPLYISGDSYSGIIIPILVKKISDDNDAGIEPRMNLKGYSIGNPVTDEVVDKNWRVPFAHRLGLIPDKLYESTKRDCQGEYVDVDPSNAACLGDLEAVTDCTKMLMIADILEPNCAADSPKSGLLERNPNIVKEDSLELLSTPEHSGPWCRAYNYVFSYVWANDEEVQAALHIRKGTKEEWSRCNRSLAYTKDVTCSVPFHKSLTSKAYKVLIYSGDHDMAVPCVGTMAWVKSLDLTESSKWRPWYVQGQVGGYTVAYAHNNYSLTYATVKGAGHTAPEYNPIQCLAMFSRWLARYPL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1032 470 FunFam Carboxypeptidase 369 467 - -
Lele34g1032 470 FunFam Serine carboxypeptidase-like 19 20 293 - -
Lele34g1032 470 Pfam Serine carboxypeptidase 31 466 IPR001563 GO:0004185|GO:0006508
Lele34g1032 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 454 IPR001563 GO:0004185|GO:0006508
Lele34g1032 470 Gene3D alpha/beta hydrolase 23 469 IPR029058 -
Lele34g1032 470 ProSitePatterns Serine carboxypeptidases, histidine active site. 437 454 IPR033124 GO:0004185
Lele34g1032 470 SUPERFAMILY alpha/beta-Hydrolases 27 469 IPR029058 -
Lele34g1032 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Lele34g1032 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Lele34g1032 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Lele34g1032 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1032 Lele-ChrLele34 19263822 19269392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1032 333 470 Calmodulin-binding Proteins AT2G22960 48.551 1.77e-43 149