Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1022 ATGGCTGTGGTTTTTCTCAGAATGCTTTCCTTTCTTGGTCTTCTTTCCATGCTCATATCTCAATTCACGGCCCAGCCAGAGTTCCTGTTTCGTGAATGTGACAATGATAATGGCAACTACACTGCTAATGGTGCCTACCAGGCCAACCTCGAGACCCTTTTGTCCAATATTGCTTCCAACACACAAATTGACTATGGTTTCTACAACTTCTCTTTTGGCCAGAACTCTGACAGAGTTAACGCTATAGGGTTGTGCAGAGGAGATGTTGCCCCTGATATCTGCCGTAGTTGCCTCAATGATTCTAGAATCCTTCTCCCACGGCTCAGCCCAAATCAGATGGAGGCAATTGGGTTCTATGACAATTGCATGTTACGCTATTCAAACCGTTCGATATTTAACGCTGACGAAATTTTACCTTCCTTCTGTTTGGCATCCCCTTCTAATGCATCAGAGGTGGATCAGTTCAATCAAGTGCTAAGGAATTTGCTGGATGATTTAAGTAGAAAAGCTTCATCAGGGAACTCTCTTCTTAAGTTTGCTACAGCGAATATTGCGGGTCCAAACTTTCAGACTTTATACGGGCTCGTGCAGTGTACACCTGATTTATCTTCAGTTCAGTGCAGTGATTGCTTGGTTGAGATAATCTCAGGACTCCCACAATGCTCTGGTGGCAAGATTGGTGGCAGAATTGTAATACCAAGCTGTAATTTTAGATACGAAACCTACCGCTTCTTCAATGATACCAATGATTCAACACCACCATCAGAAGGAAAGAACAACACGTCACGAACCATTATAATTGCTATAGCTGTGCCAATTGCTTCCGTTGTTGTCTTGCTCATCCTTGTCAGCATCTGTTTAAGAATGCGGAAACCACGGAAACATATCAGAAAAAATGAAGTCGAAGCTGGCAGTGAAATTAGGTCATCTGAGACATTGCAATTGAAGTTTGACAGCATCATAGCTGCCACAAATAACTTTTCTGAAGAAAATAAGCTTGGGCAAGGTGGATTTGGACCTGTTTACAAGGGTAAGCTCGTTGATGGACAAGAAATTGCTGTGAAAAGGTTGTCTGGGAATTCTTCCCAAGGAGATACAGAATTTAAGAATGAAGTGTTCGGATATATGGCACCTGAATATATAATGCATGGACAATTCTCAGTGAAGACGGATGTTTTCAGTTTTGGTGTACTAGTTTTAGAGATTATAACTGGTCATAAAAACAGTGAGATTTTCCAAGGGGAGAATGCAGAGAATCTAGTCAGCTTTGCATGGAGAAACTGGAGGGAAGGAACAGCCACAAGTATTGCGGACCCTGCGATTACGGGAGGTTCAAGAGATGAAATAATGAGATGCATCCACATAGGGTTGCTCTGTGTTCAAGATGACGTAGCTGACAGACCAACCATGGCTTCAGTTGAAGTCATGCTTAACAGCTACTCTGCCACCTTTCCATTGCCTTCCCAACCAATGAATAGTAGAAATTTTTCATACGCCAGATCAGGAGAGTATACCTCAGGGGCAACAAGATCAAATGAACTCGAAAATCAATCTGTTCAAGCAATTATCAAATGA 1575 0.4222 MAVVFLRMLSFLGLLSMLISQFTAQPEFLFRECDNDNGNYTANGAYQANLETLLSNIASNTQIDYGFYNFSFGQNSDRVNAIGLCRGDVAPDICRSCLNDSRILLPRLSPNQMEAIGFYDNCMLRYSNRSIFNADEILPSFCLASPSNASEVDQFNQVLRNLLDDLSRKASSGNSLLKFATANIAGPNFQTLYGLVQCTPDLSSVQCSDCLVEIISGLPQCSGGKIGGRIVIPSCNFRYETYRFFNDTNDSTPPSEGKNNTSRTIIIAIAVPIASVVVLLILVSICLRMRKPRKHIRKNEVEAGSEIRSSETLQLKFDSIIAATNNFSEENKLGQGGFGPVYKGKLVDGQEIAVKRLSGNSSQGDTEFKNEVFGYMAPEYIMHGQFSVKTDVFSFGVLVLEIITGHKNSEIFQGENAENLVSFAWRNWREGTATSIADPAITGGSRDEIMRCIHIGLLCVQDDVADRPTMASVEVMLNSYSATFPLPSQPMNSRNFSYARSGEYTSGATRSNELENQSVQAIIK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1022 524 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Lele34g1022 524 Gene3D Phosphorylase Kinase; domain 1 288 374 - -
Lele34g1022 524 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Lele34g1022 524 Gene3D Transferase(Phosphotransferase) domain 1 375 495 - -
Lele34g1022 524 Gene3D - 137 244 IPR038408 -
Lele34g1022 524 Gene3D - 26 130 IPR038408 -
Lele34g1022 524 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Lele34g1022 524 Pfam Protein tyrosine and serine/threonine kinase 375 473 IPR001245 GO:0004672|GO:0006468
Lele34g1022 524 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Lele34g1022 524 Pfam Salt stress response/antifungal 145 242 IPR002902 -
Lele34g1022 524 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Lele34g1022 524 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 373 506 - -
Lele34g1022 524 SUPERFAMILY Protein kinase-like (PK-like) 323 493 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1022 Lele-ChrLele34 19177268 19180301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1022 351 489 Receptor kinase-like Gene Family AT4G05200 43.262 2.23e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g1022 PK_Tyr_Ser-Thr 1.8e-08 CL0016