Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1019 ATGTCCATCTTCATCTTCCTCTCTCTTTTGGGATTTCTGAGCTTCACAAGCGAAGCTGTTCCAGCTTACAGAGCTCATGTCTGTACTAATGGAACCTCTTTCGAACCCAATAGTACATTCCAAGCCAATTTGAATGTCCTTCTCTCTTCCCTCACCTCCAACGCCTCTCTCCCCGACGGTTACTACCGAACCACCGTGTCCCCCTCAACCCCTTCTGCCATCACCGGGCTCTTCCTCTGTCGCGGAGACGTCACCCCCGCCGTTTGCCAACCCTGCGTCGCCGCCGCATCCAAGGAGATAACACGCCTCTGCCCAAACCAAACAGAGTCCATAATCTGGTACGATGAGTGTATGCTTCGTTACTCGAACGGGGACTTGAACCCCATGGTTCCTGCTACGAATTTGAGAAACTTCAACACCGTAGCTAGCTCTGAATTGGATCAATTCGACGCCGTGCTGTCGAGCATGTTGAATTATGTGACCGGAAAAGCTACTACCCAGACAGTGAAGAGGTTCGCTACGGCGGAAGTGAACTTCAAGTCGTCAACCTTGTACGGCCTCGCACAGTGCATTCCTGATTCATCCGTTTGTAATTCTTGTTTCTCAAGTGCCATAGCATCTCTTCCAAGTTGCTGTAGTGGGAGCAAGGGGGCAACGGCTCTGGTTCCATCATGTAATATAAGATATGAATTTTATCCGTTTTACAATATAACCCACGTATCCTCTGAACCACTAGTTCCTCCTAATTCAGAAAGTAGAAATATCTCAATGATTGTTGCGATTGTTGTCCCTATTGTTGTTGCTTTGGCACTTCTCGTCGTGGGTTGTTGTTTCCTCCGTAAGAGAACAAGCAAGAAGTACAACACATTCACAGAGGATGGCACTGGAACTGATCTTTCAGAGATAGAGTCTCTGCAATTTGAATTGGCTGCAATAGAAGCTGCAACGAGAAAGTTCTCGGATGAGAACAAGATTGGCCAAGGTGGATATGGGGCAGTGTATAAGGGTGTACTTCCAAACGGACAGGAGATAGCTGTGAAGAGGTTGTCGGTAACCTCCTTGCAGGGTGCTTTGGAGTTTACAAATGAAGCTGTTCTTGTGGCCAAGCTTCAACATAGGAATTTAGTGAGGCTGTTGGGATTTTGCTTAGAGGGACAAGAGAAGATACTCGTCTATGAATATATAACGAACAAAAGCCTCGACAAGTTTCTATTTGATCCAGAAAGGAAAAGAATACTAGATTGGTCAAAACGTTACAAGATTATAGTAGGCGTTGCCCGAGGAATGCTATATCTCCATGAAGATTCTCAACTTAGGATAATTCACCGTGATCTTAAAACTAGTAATGTTCTATTAGATGCTAATATGAATCCGAAAATTTCGGACTTTGGCATGGCAAAAATCTTTCAGGGGGATCAGATTCAATTAAACACGAGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAGTATGCAATGCATGGACAATTTTCTGTAAAATCAGATGTGTTTAGCTTTGGTGTCTTAGTTTTGGAGATTATTACCGGCAAGAAGATCACTGATTTGTGCCAATCACATCAAGTTGATGACCTGTTAAGCTATGCTTGGACAAATTGGACACTAAACACGCCATTGGAGTTGTTGGATCCAACACTGAGAGGTTCATATTCAAGAAATGAAGTCGTAAGATGCATTCATATAGCTTTATTATGCGTTCAGGAGAATCCTTCTGATAGACCTTCGATGGCAAATATAGCGCTTATGCTCAACAGTTACTCTGTTACTTTGTCATTACCTCGAAAGCCACCATCCTTTATGCGCAGAAGAACACCAAACAGGCAAAACAATGGTGTTGATTCTGACCAATCTACCTGTTCGATTCTATGGTCTACCAATGATGCTTCCATTACTGAAGTTTACCCTCGATAA 1932 0.4389 MSIFIFLSLLGFLSFTSEAVPAYRAHVCTNGTSFEPNSTFQANLNVLLSSLTSNASLPDGYYRTTVSPSTPSAITGLFLCRGDVTPAVCQPCVAAASKEITRLCPNQTESIIWYDECMLRYSNGDLNPMVPATNLRNFNTVASSELDQFDAVLSSMLNYVTGKATTQTVKRFATAEVNFKSSTLYGLAQCIPDSSVCNSCFSSAIASLPSCCSGSKGATALVPSCNIRYEFYPFYNITHVSSEPLVPPNSESRNISMIVAIVVPIVVALALLVVGCCFLRKRTSKKYNTFTEDGTGTDLSEIESLQFELAAIEAATRKFSDENKIGQGGYGAVYKGVLPNGQEIAVKRLSVTSLQGALEFTNEAVLVAKLQHRNLVRLLGFCLEGQEKILVYEYITNKSLDKFLFDPERKRILDWSKRYKIIVGVARGMLYLHEDSQLRIIHRDLKTSNVLLDANMNPKISDFGMAKIFQGDQIQLNTRRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVLVLEIITGKKITDLCQSHQVDDLLSYAWTNWTLNTPLELLDPTLRGSYSRNEVVRCIHIALLCVQENPSDRPSMANIALMLNSYSVTLSLPRKPPSFMRRRTPNRQNNGVDSDQSTCSILWSTNDASITEVYPR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1019 643 Pfam Protein tyrosine and serine/threonine kinase 322 587 IPR001245 GO:0004672|GO:0006468
Lele34g1019 643 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 280 394 - -
Lele34g1019 643 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Lele34g1019 643 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 21 126 - -
Lele34g1019 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Lele34g1019 643 FunFam cysteine-rich receptor-like protein kinase 10 395 597 - -
Lele34g1019 643 ProSiteProfiles Gnk2-homologous domain profile. 22 126 IPR002902 -
Lele34g1019 643 Gene3D Phosphorylase Kinase; domain 1 280 394 - -
Lele34g1019 643 MobiDBLite consensus disorder prediction 604 625 - -
Lele34g1019 643 Gene3D - 21 125 IPR038408 -
Lele34g1019 643 Gene3D - 132 234 IPR038408 -
Lele34g1019 643 CDD STKc_IRAK 325 591 - -
Lele34g1019 643 SMART serkin_6 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1019 643 SUPERFAMILY Protein kinase-like (PK-like) 305 621 IPR011009 -
Lele34g1019 643 ProSiteProfiles Gnk2-homologous domain profile. 131 234 IPR002902 -
Lele34g1019 643 ProSiteProfiles Protein kinase domain profile. 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1019 643 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 639 - -
Lele34g1019 643 Gene3D Transferase(Phosphotransferase) domain 1 395 598 - -
Lele34g1019 643 Pfam Salt stress response/antifungal 145 231 IPR002902 -
Lele34g1019 643 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Lele34g1019 643 MobiDBLite consensus disorder prediction 609 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1019 Lele-ChrLele34 19168091 19170567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1019 1 643 Receptor kinase-like Gene Family AT4G05200 48.358 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g1019 PK_Tyr_Ser-Thr 1.3e-47 CL0016