Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1016 ATGAAGTCCATGATTATGTCTTCCTCCAAAATTTTCTTTCTCTTGTTTATTAGCTGCAACGTTTGCCATGAGTTGTACCCTTTCTATCAATCGGAAGCTTCAAGGGTTCCTCCTACAAATACTACTGCTTCCCAAGGAAAAGGTGGAATCTCTACGGGGACGTTTGTTGCAATTGTGGTTCCAATTTCTGTTGCTGTCCTCATATTAATAGTCGGCATTTTCTTGAGTAAACGAATAAGGAAGAAGGATGACTATGTTCCCGAAGGAAAATCTGCAATTGACATCAGCAATTTGGATTGGCTGCAATATGATTTCCGTACAATTGAAGCAGCCACCAACCAGTTCTCTGCAGATACTAAGATTGGTCAAGGCGGATTTGGGATGGTTTACAAGGGGACGCTTGCAAATGGACAAGAAATTGCTGTGAAGAGATTCTCAGGAGGATCTAGCCAAGGTGCACAAGCATTTAAGAATGAAGTAGAGGTGGTTGCCAAGGTACAACACAGAAATTTAGTGAGGCTTTTGGGCTTCTGTGTGCGAGGAGAAGAGAAGATTCTTGTTTATGAATATGTTCCCAACAAAAGTCTTGTTTACATTCTTTTCGACCCTGAAAAGCAAAGGCAGCTAGATTGGACGAAGCGTTATAATATTCTCAAGGGAATTGCTCGAGGCATTCAATATCTTCATGAAGAATCAAGTCTTAAAATTATACATCGTAATCTTAAAGCTAGTAATATATTATTAGATAATGATATGAATCCAAAAATTTCAGATTTTGGTTTGGCAAGAATTTTTACCTTCGACCAAATTCAAGGAAATACCAATCGCATTGTTGGAATATACGGTTATATGTCTCCGGAATATAACTTGCGTGGAGATTTTTCTGTTAAGTCGGATGTGTATAGCTTCGGTGTCCTTCTAATGGAGATTATAAGTGGGAAGAGAAATCGTTCTTTTCATCAAATGGAGGGTGCTGATGATGACCTGCTGAGCTATGCCTGGAAACTTTGGAAGGATGGAGAACCCTTGGAACTGTTGGACCCCACAATAAGAGAATCTTACACTCCAAATGAAGTAATGAGATGCATTCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCTGATAGACCTTCAATGGCATCCATAGTTCTGATGCTTGATAGTTACTCTGTGGCTCTGCCAACTCCTTCGCAGCCTGCATTTTTTGTGCAAAGTGGAACTGATCCAAACATGCCAAAGGACTTCCAATTTGGTCAATCTACGACCAAGTCAACGCCCATGTCAGTCAATGACATGTCTGTTAGTGAAGTATTGCCTCGGAAGGGGAAAAAAAGTGGTTCAAATGTGCTTCTAATCCCCATTTGGCTAGCCATCACTTTCCAACAAGAAATTGAAAAAGTCTTCCGCAACCAAATTTCAATGACTGGCGTCGACCTTCTCCATGATCAACCATCTCTTTCTCTGACCCTGCAATATCTTCTTCTTCCCCATGAACGATTCTCCCCCACTCGCCATTGA 1521 0.4096 MKSMIMSSSKIFFLLFISCNVCHELYPFYQSEASRVPPTNTTASQGKGGISTGTFVAIVVPISVAVLILIVGIFLSKRIRKKDDYVPEGKSAIDISNLDWLQYDFRTIEAATNQFSADTKIGQGGFGMVYKGTLANGQEIAVKRFSGGSSQGAQAFKNEVEVVAKVQHRNLVRLLGFCVRGEEKILVYEYVPNKSLVYILFDPEKQRQLDWTKRYNILKGIARGIQYLHEESSLKIIHRNLKASNILLDNDMNPKISDFGLARIFTFDQIQGNTNRIVGIYGYMSPEYNLRGDFSVKSDVYSFGVLLMEIISGKRNRSFHQMEGADDDLLSYAWKLWKDGEPLELLDPTIRESYTPNEVMRCIHIGLLCVQEDPADRPSMASIVLMLDSYSVALPTPSQPAFFVQSGTDPNMPKDFQFGQSTTKSTPMSVNDMSVSEVLPRKGKKSGSNVLLIPIWLAITFQQEIEKVFRNQISMTGVDLLHDQPSLSLTLQYLLLPHERFSPTRH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1016 506 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Lele34g1016 506 Pfam Protein tyrosine and serine/threonine kinase 118 385 IPR001245 GO:0004672|GO:0006468
Lele34g1016 506 SUPERFAMILY Protein kinase-like (PK-like) 100 407 IPR011009 -
Lele34g1016 506 Gene3D Phosphorylase Kinase; domain 1 78 190 - -
Lele34g1016 506 FunFam cysteine-rich receptor-like protein kinase 10 191 394 - -
Lele34g1016 506 FunFam Cysteine-rich receptor-like protein kinase 10 77 190 - -
Lele34g1016 506 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 437 - -
Lele34g1016 506 ProSiteProfiles Protein kinase domain profile. 115 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1016 506 Gene3D Transferase(Phosphotransferase) domain 1 191 395 - -
Lele34g1016 506 CDD STKc_IRAK 121 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1016 Lele-ChrLele34 19151995 19158683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1016 18 441 Receptor kinase-like Gene Family AT4G05200 53.636 5.82e-163 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g1016 PK_Tyr_Ser-Thr 1.2e-47 CL0016