Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1015 ATGAAGTCCATGATTACGGCTTCCTCCAAAATTTTCTTTCTCTTGTTTATTAGCTGCAACGTTTGCCATGAGTTGTACCCTTTCTATCAATCGGAAGCTGCAAGGGTTCCTCCTACAAATACTACTGCTTCCCAAGGAAAAGGTGGAATCTCAACGGGGACGGTTGTTGCAATTGTGGTTCCAATTTCTGTTGCTGTCCTCATATTAATAGTCGGCATTTTCTTGAGTAAACGAATAAGGAAGAAGGATGACTATGTTCCCGAAGGAAAATCTGCAATTGACATCAGCAATTTGGGTTCGCTGCAATATGACTTCCGTACAATTAAAGCAGCCACCAACCAGTTCTCTGCAGATACTAAGATTGGTCAAGGCGGATTTGGGGTGGTTTACAAGGGGACGCTTGCAAATGGACAAGAAATTGCTGTGAAGAGACTCTCCCGAGGATCTAGGCAAGGTGCACAAGAATTTAAGAATGAAGTAGAGGTGGTTGCCGAGTTACAACACAGAAATTTAGTGAGGCTTTTGGGTTTCTGTGTGCGAGGAGAAGAGAAGATTCTTGTTTATGAATATGTTCCCAACAAAAGTCTTGATTACATTCTTTTTGAAACGTCAGAAGGAAAATTTGAGTTTGTGGTTTTGCTAGCAGCGGCAGCAAAACAGCTTTCTATGCATTCACAAGATTCCGTTACTTATAAACCAAAAACCACCTTTGAAAGCAACCTCAACCTCCTCCTCTCTTCTCTTCCTTCTAAAGCCAGCGACGGCATCCATTTCTACCGAACAAGAACCGGATATGCCTCCCCTGACGCCGTCAATGGCCTCTTCCTCTGCCGTGGCGACACCCTCACTGCAACTTGCCGTGAATGTGTCTCCGACGCAGCCGTAGAGATAAAACGCCGTTGCCCAGATCAGAAAGAGGCCATAATCTGGTACGACGTCTGCATGCTTCGATACTCCAACCAATCTTTCAACAGAATCGTACCTTCCACTGACCTGTCGAATACGAAGAGCGTAGCTCCGGAGGACATGGAGAGGTTCAATGAAGTGCTTTCCGGGCTGCTAAATTCTGTGGCGGCGAAAGTTTTGAAGTCTCAGAGCAAGTTTGCGACGGAGCAAGTGAACTTCACAAGAACAGAGACTCTTTACGGATTAGAACAGTGCACCCCCGACCTGAGTGTGTTCGACTGTAATACGTGTTTGAGAAGAGCCATCGCCGAAGTTCCGAATTGCTGCGATGGAAAACAAGGGGCAACAGTGTTGCTTCCTGCCTGCAACATCAGATATGAATTCTACCCATTTTTCAATCCCACTCAAGACTAG 1320 0.4561 MKSMITASSKIFFLLFISCNVCHELYPFYQSEAARVPPTNTTASQGKGGISTGTVVAIVVPISVAVLILIVGIFLSKRIRKKDDYVPEGKSAIDISNLGSLQYDFRTIKAATNQFSADTKIGQGGFGVVYKGTLANGQEIAVKRLSRGSRQGAQEFKNEVEVVAELQHRNLVRLLGFCVRGEEKILVYEYVPNKSLDYILFETSEGKFEFVVLLAAAAKQLSMHSQDSVTYKPKTTFESNLNLLLSSLPSKASDGIHFYRTRTGYASPDAVNGLFLCRGDTLTATCRECVSDAAVEIKRRCPDQKEAIIWYDVCMLRYSNQSFNRIVPSTDLSNTKSVAPEDMERFNEVLSGLLNSVAAKVLKSQSKFATEQVNFTRTETLYGLEQCTPDLSVFDCNTCLRRAIAEVPNCCDGKQGATVLLPACNIRYEFYPFFNPTQD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1015 439 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 212 437 - -
Lele34g1015 439 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Lele34g1015 439 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 77 190 - -
Lele34g1015 439 FunFam Cysteine-rich receptor-like protein kinase 10 329 433 - -
Lele34g1015 439 Pfam Protein tyrosine and serine/threonine kinase 118 215 IPR001245 GO:0004672|GO:0006468
Lele34g1015 439 Gene3D - 218 323 IPR038408 -
Lele34g1015 439 Gene3D - 329 433 IPR038408 -
Lele34g1015 439 ProSiteProfiles Gnk2-homologous domain profile. 326 433 IPR002902 -
Lele34g1015 439 SUPERFAMILY Protein kinase-like (PK-like) 98 211 IPR011009 -
Lele34g1015 439 Pfam Salt stress response/antifungal 341 430 IPR002902 -
Lele34g1015 439 Pfam Salt stress response/antifungal 229 321 IPR002902 -
Lele34g1015 439 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 218 323 - -
Lele34g1015 439 ProSiteProfiles Protein kinase domain profile. 115 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1015 439 ProSiteProfiles Gnk2-homologous domain profile. 219 323 IPR002902 -
Lele34g1015 439 Gene3D Phosphorylase Kinase; domain 1 78 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1015 Lele-ChrLele34 19147060 19151914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1015 208 437 Receptor kinase-like Gene Family AT4G05200 42.194 1.32e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g1015 Stress-antifung 4e-14 No_clan