Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g1009 ATGAATTCCATTAAGGCCTTCCTGCTCCTTAGTCTTACAATCTTCTTGATTCCCAGAATCAGAGCACAGGATCCGCAGCTCTTCTGCTCAGGCCCAGTTTATGCCCCAAACGCCACATACCACGCGAATCTTATTCGCTTACTCTCAACCCTTTCCTCCAACGCCGCCAATCGCAATGATGGCTTTTACAACACCACTGTCGGACAAGACATCGACACCGTCTACGGCCTCTTCCTCTGCCGCGGAGATGCCGCTGTTCCGGCATGTCACGCATGTGTTTCCATGGCAACCAAAGATATCATGCAATGCAACCAAACACAAGCCGTGGGTTGGTACGACAAGTGCACGTTACGATACTCGGATGCAGATTTCTTCTCCATAGAGCAAGATGATCCCACAAAAATCCTGTACAACATGGGCAACGCAACAGACCCGACCAGCTTTATGCACCTGGTGGTTCATACCATGAACGCGGTGGCGAAAGAAGCGGCGTACGGTGGCCGCGGAAGAAAGAAATTTGCAACGAAAGAAGAAAACTATAGTTCTTTCCAAACTCTGTATACTATGGCGCAGTGCACGCCGGATATATCTGGAGATGAATGTCATAGCTGTTTGAGCAGAATAATTGGAGAGTACCCGAATTGCTGTTTTGGGAGGGTAGGGGCAATTGCACGCACCGTCAGTTGCAACGTAAGGTATGAATTGTACCCCTTTTATGGAGTGGTTTCGCCGCTGCCTTCTCTTCATCCGCCGCCAGAGTTCACTTCCAACGATAAAAGAAAGATTTCGGCTGGGACAATTATTGCCATAGTCGTCGTTCAAACAGCGATATTCGTATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAAATGGAGAGAAAAGAAGAAAGCTTCAGTTCCTAAAGCTGCTGAGATTTCAAGTGAAGAGTCACTATATTTTGATTTGGATACCATCAAATCAGCCACAGACGACTTTTCCCCTGACAATAAACTTGGTCAAGGAGGATATGGTGAGGTGTATAAGGGTATTTTACCTGGTGGACAAGAGTTAGCTGTGAAGAGACTATCAAGTAGTTCCAAACAAGGAGTGCCAGAATTTAAAAATGAAGTAGTTACAATGGCAAAACTTCAACATAGAAATCTTGTAAGGTTTCTCGGATTTTGTTTGGATGAAGAAGAAAAGATACTTGTATATGAATTTTTGCCCAACAAAAGCTTGGATAATTTTCTGTTTGGACCTGAAAACAAAGGTAAATTGAATTGGTCAAATAGATTCAAGATTATTGTAGGCATTGCAAGGGGGATACTTTATCTTCATGAAGATTCTCAACTCAAAATTATACATCGCGATCTGAAATCTAGCAATGTACTGTTGGATGAAGATTTGAATCCAAAAATCTCTGATTTTGGCATGGCTAGAATTTTTGGAATCGATCAAACTCAAGGCAGCACAAGTAAAGTTGTCGGCACATTTGGCTACATGTCTCCTGAATATGCAATGCATGGTCATATTTCAGTCAAAGTTGATATATATAGTTTTGGTGTCCTAATCCTGGAGATAATTAGTGGCAAGAAGAATACAACTTTCTATGCATCAAATTATGCTGAAGACTTGCTAAGCTATGCCTGGAAACTCTGGAGGGAAGGGGCGCCATTAGAATTGCTGGATCCTAGTCTAAGAAATTCTTGTTCAAGAAACGAAGTTGTTAAATGCATTCATATGAGCTTGTTGTGTATCCAGGAAAATCCATCTCTAAGACCTACGATACAATCTATTATGGTGATGCTAAGTAGTCACTCAATCACCTTGCAAGATCCTCAAGAGCCAGCATTTTTGTTCGATCGCCATAGAACAAATTCAAACAATCTTGCAACTTTTGAGATTAGCTCGGACCAATCTACAAGCAAGTCAATGCAACGGTCTGTGGATGGAGATCCAATCTCTGAATTGCATCCTCGTTAG 1962 0.4261 MNSIKAFLLLSLTIFLIPRIRAQDPQLFCSGPVYAPNATYHANLIRLLSTLSSNAANRNDGFYNTTVGQDIDTVYGLFLCRGDAAVPACHACVSMATKDIMQCNQTQAVGWYDKCTLRYSDADFFSIEQDDPTKILYNMGNATDPTSFMHLVVHTMNAVAKEAAYGGRGRKKFATKEENYSSFQTLYTMAQCTPDISGDECHSCLSRIIGEYPNCCFGRVGAIARTVSCNVRYELYPFYGVVSPLPSLHPPPEFTSNDKRKISAGTIIAIVVVQTAIFVLQVSLCFLCLKWREKKKASVPKAAEISSEESLYFDLDTIKSATDDFSPDNKLGQGGYGEVYKGILPGGQELAVKRLSSSSKQGVPEFKNEVVTMAKLQHRNLVRFLGFCLDEEEKILVYEFLPNKSLDNFLFGPENKGKLNWSNRFKIIVGIARGILYLHEDSQLKIIHRDLKSSNVLLDEDLNPKISDFGMARIFGIDQTQGSTSKVVGTFGYMSPEYAMHGHISVKVDIYSFGVLILEIISGKKNTTFYASNYAEDLLSYAWKLWREGAPLELLDPSLRNSCSRNEVVKCIHMSLLCIQENPSLRPTIQSIMVMLSSHSITLQDPQEPAFLFDRHRTNSNNLATFEISSDQSTSKSMQRSVDGDPISELHPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g1009 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 637 - -
Lele34g1009 653 CDD STKc_IRAK 331 596 - -
Lele34g1009 653 SUPERFAMILY Protein kinase-like (PK-like) 310 621 IPR011009 -
Lele34g1009 653 SMART serkin_6 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1009 653 ProSiteProfiles Protein kinase domain profile. 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g1009 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Lele34g1009 653 MobiDBLite consensus disorder prediction 628 642 - -
Lele34g1009 653 Gene3D Phosphorylase Kinase; domain 1 287 400 - -
Lele34g1009 653 MobiDBLite consensus disorder prediction 628 653 - -
Lele34g1009 653 Gene3D Transferase(Phosphotransferase) domain 1 401 610 - -
Lele34g1009 653 Pfam Salt stress response/antifungal 32 121 IPR002902 -
Lele34g1009 653 Pfam Salt stress response/antifungal 141 236 IPR002902 -
Lele34g1009 653 FunFam cysteine-rich receptor-like protein kinase 10 401 603 - -
Lele34g1009 653 FunFam Cysteine-rich receptor-like protein kinase 10 132 238 - -
Lele34g1009 653 FunFam Cysteine-rich receptor-like protein kinase 10 289 400 - -
Lele34g1009 653 Gene3D - 26 124 IPR038408 -
Lele34g1009 653 Gene3D - 132 238 IPR038408 -
Lele34g1009 653 ProSiteProfiles Gnk2-homologous domain profile. 130 238 IPR002902 -
Lele34g1009 653 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Lele34g1009 653 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Lele34g1009 653 Pfam Protein kinase domain 328 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g1009 Lele-ChrLele34 19112470 19115202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g1009 9 653 Receptor kinase-like Gene Family AT4G05200 45.958 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele34g1009 Pkinase 7.2e-46 CL0016