Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0997 ATGGCTGCTTCAGAACATTCTTCCACTGATGAAGTCTTGGAAAACCTTCAAGAGGAAACCAGCAAAGAATCAAAGCTAGAATTTTCCATCGATGAGGAATCATTGATTATCAGAATGTACAATCTAGTCGGGGAAAGGTGGGCTTTGATTGCTGGGAGGATCCCAGGAAGAACAGCCGAAGAGATCGAAAAGTACTGGACTGCTACATACTCAACAAGTGAATGA 225 0.4267 MAASEHSSTDEVLENLQEETSKESKLEFSIDEESLIIRMYNLVGERWALIAGRIPGRTAEEIEKYWTATYSTSE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0997 74 FunFam MYB-like transcription factor 27 69 - -
Lele34g0997 74 Pfam Myb-like DNA-binding domain 27 66 IPR001005 -
Lele34g0997 74 SUPERFAMILY Homeodomain-like 27 70 IPR009057 -
Lele34g0997 74 MobiDBLite consensus disorder prediction 1 25 - -
Lele34g0997 74 CDD SANT 27 66 IPR001005 -
Lele34g0997 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Lele34g0997 74 SMART sant 24 72 IPR001005 -
Lele34g0997 74 MobiDBLite consensus disorder prediction 11 25 - -
Lele34g0997 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 71 - -
Lele34g0997 74 Gene3D - 27 73 - -
Lele34g0997 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0997 Lele-ChrLele34 19051066 19051532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0997 29 68 MYB Transcription Factor Family AT5G35550 62.500 1.39e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele34g0997 Myb_DNA-binding 6.2e-08 CL0123