Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0989 ATGGCTTCTTCTTCCCACCAATCTCTCCTTGACAAACCCAAAAAATCCATTTCCAGAACCATCTGGTTTGCTCTCTCTCTAGCTGCTCTCATCAGCTCTGCTCTTGCTGCTTCTTATCTCTTCATACCCTCCTCCTCCTCCTTCAACCTCTCTCTTCCCCATCGCAATCTCTGTGATCATGCCCTTCACAAATCATCATGCCTTGCCCACCTCTCTGAATTAACTCAAGCTTCAACCTTTGTTACCACCAACGACCAAAACTCGAACTTGCTCCAATCTTTCCTCATGAAAACCACCTCACAAATCCAGAAAACTGTGGACTCAACCAAAGCCGTCAAATACAGAATCAACGATCCAAAACAGCAGCAAGCTCTGCTTGTGTGTGAGCAACTTCTGGATTCGTCCCTTGATAGAGTTTGGGACTCTATCGTGGCTCTCACAGAAAAGACCACCAAATCCTACCACGATGCTCACACGTGGCTGAGCACTGTCCTCACTAACCACATCACTTGTTTGGATGAGTTAGAAGGATCAGCTCGAGCCCTTATAGAATCTGAGCTCAATGACTTGGTCTCCAGAGCCAGAACCACCCTAGCCATGCTTGTTCATGTGAAGACCTCTGATATCGACGCCATCGATGAGCCACTTAATGGGGAGTTTCCCTCATGGGTGACGAGTAAGGATAGGAGGCTTCTGGAAGCTTCTGCTAATGACATAAAGGCCAACGTGGTGGTGGCTAAGGATGGAAGTGGCAGGTTTAAGACTGTGAAGGAGGCTGTGGCTTCGGCACCTGATAATGGTAAGACGAGGTATGTGATCTATGTGAAGAAGGGAGTTTATAAAGAAAACGTTGAGATTGGATCGAAGAAGAAGAATGTTATGCTGGTGGGTGATGGTATGGATGCGACGATCATCACTGGAAGCTTGAATGCCGTCGATGGAACGCCCACCTTCAGAACTGCCACCGTCGCTGCGGTTGGGGATGGATTCATTGCCCAAGACATATGGTTTCAGAACACTGCAGGCCCTCAGAAGCATCAGGCGGTGGCTCTCCGCGTCGGCGCCGATCTCTCCGTCATCAACCGCTGCCGTGTGGACGCCTTCCAAGACAGTCTATACACCCACACCAACAGGCAATTCTACCGTGACTCCTTCATCACAGGCACCGTCGACTTCATCTTCGGCAATGCCGCCGTCGTGTTCCAAAAGTGCAACCTCGTGGCCCGAAAGCCCATGAATAACCAGAACAACATGGTCACAGCTCAAGGACGCGAAGACCCGAACCAGAACACAGGGACTTCAATCCAGCAATGTAACCTAACACCAAGCTCCGATCTCAAGCCCGTCGTGGGTTCAGTCAAAACCTTCTTGGGCCGTCCATGGAAGGAATTCTCTCGAACTGTGGTGATGCAGTCATCCCTGGATAGCCATATTGATCCAGCAGGATGGGCTCCATGGGACAACAAGGAATCGACACTGAAGAATTTGTATTATGGAGAGTATCAGAACAAAGGCTCTGGTGCTGGTACTGCCAAGAGAGTGAAATGGGCTGGTTATCATGTGATTACAAGTGCTGCTGAGGCAAGCAAATTCACGGTGGCTCAGCTGATTCAAGGTGCCAATTGGCTCAAGAACACTGGGGTCGCCTTCATTGAAGGGCTGTAG 1665 0.4973 MASSSHQSLLDKPKKSISRTIWFALSLAALISSALAASYLFIPSSSSFNLSLPHRNLCDHALHKSSCLAHLSELTQASTFVTTNDQNSNLLQSFLMKTTSQIQKTVDSTKAVKYRINDPKQQQALLVCEQLLDSSLDRVWDSIVALTEKTTKSYHDAHTWLSTVLTNHITCLDELEGSARALIESELNDLVSRARTTLAMLVHVKTSDIDAIDEPLNGEFPSWVTSKDRRLLEASANDIKANVVVAKDGSGRFKTVKEAVASAPDNGKTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGMDATIITGSLNAVDGTPTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAFQDSLYTHTNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPMNNQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSVKTFLGRPWKEFSRTVVMQSSLDSHIDPAGWAPWDNKESTLKNLYYGEYQNKGSGAGTAKRVKWAGYHVITSAAEASKFTVAQLIQGANWLKNTGVAFIEGL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0989 554 SMART PMEI_2 49 200 IPR006501 GO:0004857
Lele34g0989 554 Pfam Pectinesterase 242 539 IPR000070 GO:0030599|GO:0042545
Lele34g0989 554 CDD PMEI-like_4 65 202 - -
Lele34g0989 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 181 IPR006501 GO:0004857
Lele34g0989 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 199 IPR035513 -
Lele34g0989 554 PANTHER PECTINESTERASE 36 544 - -
Lele34g0989 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 204 IPR035513 -
Lele34g0989 554 ProSitePatterns Pectinesterase signature 1. 267 286 IPR018040 -
Lele34g0989 554 Pfam Plant invertase/pectin methylesterase inhibitor 55 189 IPR006501 GO:0004857
Lele34g0989 554 FunFam Pectinesterase 236 554 - -
Lele34g0989 554 SUPERFAMILY Pectin lyase-like 240 553 IPR011050 -
Lele34g0989 554 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Lele34g0989 554 Gene3D - 236 554 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0989 Lele-ChrLele34 19023614 19025770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0989 3 554 Carbohydrate Esterase AT1G11580 55.080 0.0 605