Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0988 ATGGCTGCCTCCCACCAGTCCCTCCTTGACAAACCCAGACAATCCATTTCCAGAACTATCTTCCTTCTTCTCTCGCTAGCTGCTCTCGTCGGCTCTGTTCTTTTTGCGTCTTATCTCTTCTCACCAACTTCCTTCGTCTTCAACCTCTCTCACCCTCGCCATATCTGCGACCATGCCCTCCACAAATCATCATGCTTGTCCCATCTCTCTGAACTACCCAAAGCTTCGATCTTTGCCTCAAAAGAAGAAGAATCCCACTTGCTTGAATCCTTCCTGATGAAAACCACCTCACAGATCCAGAAAACTGTGGACTCAACCAAAGCCATCAAATTCAGAATCAACGATCCAAAACAGCAACAAGCCCTGCTTGTGTGTGAGCAACTTCTGGACTCGTCCCTTGATAGAGTTTCGGACTCAATGGTGGCTCTCACAGAAAAGACCACCAAATCCTATCAAGATGCTCACACGTGGCTGAGCACTGTCCTCACTAACCACATCACTTGCTTGGATGAGTTAGAAGGATCAGCTCGAGCCCTTATAGAATCTGAGCTCAATGACTTGGTCTCCAGAGCCAGAACCTCCCTAGCCATGCTTGTTCATGTGAAGCCCCTTGATATCGATGCTATCGATGAGCCACTTAATGGTGAGTTGCCCTCATGGGTGACGGGAAAAGACAGGAAGCTTCTGGAAGCTTCCGCTAATGACATAAAGGCCAACGTCGCGGTGGCCAAGGATGGAAGTGGCAGGTTTAAGACTGTGAAGGAGGCTGTAGATTCGGCACCTGATAACAGTAAGACGAGGTATGTGATATATGTGAAGAAGGGAGTTTATAAAGAGAATGTTGAAATCGGATCGAAGAAGAAGAATGTGATGCTGGTAGGTGATGGTAAAGATGCGACGATCATCACCGGAAGCTTGAACTTCGTCGATGGAACACCCACCTTCAGAACTGCCACCGTCGCTGCGGTTGGGGATGGATTCATAGCCCAAGACATATGGTTCCAGAACACGGCAGGCCCTCAGAAGCACCAAGCGGTGGCTCTCCGCGTCGGCGCCGATCTATCTGTCATCAATCGCTGCCGTGTCGAAGCCTTCCAAGACACTCTGTACGCCCACTCCAACAGGCAATTCTATCGTGACTCCATCATCACCGGCACCGTCGACTTCGTCTTTGGCAATGCAGCCGTGGTGTTCCAGAAATGCTTCCTAGAGGCTCGAAAGCCAATGGCTAAACAGAACAACATGGTGACAGCACAAGGACGCGAAGACCCAAACCAGAACACGGGAACTTCAATCCAGCAATGTAACCTAACACCAAGGTCCGATCTCAAGCCAGTGATCGGTTCAGTGAAAACATTTTTGGGTCGTCCATGGAAGGAGTTCTCAAGAACGGTGGTGATGCAATCGTTCCTGAGTACCCACATTGATCCAGCAGGATGGGCTCCATGGGACGACAAGCAATCGACACTGAAGAATTTGTATTATGGAGAGTACCAGAACAAAGGACCTGGTGCTGGTACTGCCAAGAGAGTGAAATGGCCTGGTTATCATGTGATTACAAGTGCTTCAGAGGCAAGCAAATTCACGGTGGCTCAGCTGATTCAGGGTGGCACTTGGCTCAAGAACACTGGGGTAGCCTTCATTGAAGGGCTCTAA 1656 0.4952 MAASHQSLLDKPRQSISRTIFLLLSLAALVGSVLFASYLFSPTSFVFNLSHPRHICDHALHKSSCLSHLSELPKASIFASKEEESHLLESFLMKTTSQIQKTVDSTKAIKFRINDPKQQQALLVCEQLLDSSLDRVSDSMVALTEKTTKSYQDAHTWLSTVLTNHITCLDELEGSARALIESELNDLVSRARTSLAMLVHVKPLDIDAIDEPLNGELPSWVTGKDRKLLEASANDIKANVAVAKDGSGRFKTVKEAVDSAPDNSKTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGKDATIITGSLNFVDGTPTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVEAFQDTLYAHSNRQFYRDSIITGTVDFVFGNAAVVFQKCFLEARKPMAKQNNMVTAQGREDPNQNTGTSIQQCNLTPRSDLKPVIGSVKTFLGRPWKEFSRTVVMQSFLSTHIDPAGWAPWDDKQSTLKNLYYGEYQNKGPGAGTAKRVKWPGYHVITSASEASKFTVAQLIQGGTWLKNTGVAFIEGL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0988 551 CDD PMEI-like_4 63 199 - -
Lele34g0988 551 SMART PMEI_2 47 197 IPR006501 GO:0004857
Lele34g0988 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 201 IPR035513 -
Lele34g0988 551 Pfam Plant invertase/pectin methylesterase inhibitor 53 188 IPR006501 GO:0004857
Lele34g0988 551 PANTHER PECTINESTERASE 30 541 - -
Lele34g0988 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 196 IPR035513 -
Lele34g0988 551 Pfam Pectinesterase 239 536 IPR000070 GO:0030599|GO:0042545
Lele34g0988 551 Gene3D - 233 551 IPR012334 -
Lele34g0988 551 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Lele34g0988 551 SUPERFAMILY Pectin lyase-like 237 550 IPR011050 -
Lele34g0988 551 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Lele34g0988 551 FunFam Pectinesterase 233 551 - -
Lele34g0988 551 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0988 Lele-ChrLele34 19017153 19018982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0988 1 551 Carbohydrate Esterase AT1G11580 55.615 0.0 609