Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0987 ATGTTTCAACAGCCAAACATAATTGATTCTGATATGCTGGATATGTCCCACAAGATGTCGTCCGACAGTGATCTAATGGGAAGGAAGACCAATGTTGTCGACGATGATTACGAGACCAAATCGGTGACTGAAACAACCATGGAAGCTCCTTCCGGTGACGACCAAGACCCCGCCTACCAACGTCCCAAAAAGAAGCGCTACCACCGCCACACACAGCACCAAATACAAGAGTTGGAAGCCTTCTTCAAGGAGTGTCCCCACCCAGATGACAAACAAAGGAAAGAGCTGAGCCGTGAGCTGGGATTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAAATGAAGGCACAGCATGAACGGCATGACAATTCTATATTGAAGTCTGAGAATGAAAAGCTTCGTGCTGAGAACGATAGGTACAAGGAAGCCCTAAGCAACGCTTCATGCCCCAACTGCGGAGGCCCTGCCGCTCTTGGTGAAATGTCCTTTGACGAGCAGCATCTCAGGATTGAGAATGCTCGTTTAAGAGAAGAGATAGATAGGATATCAGGAATTGCAGCCAAATACGTTGGAAAGCCAGTGACAACGTTTTCACACCTTTCATCTCATCATCATGTTCCTTCACGCTCGCTGGAAGATCTTGGAGTTGGTAGTAACTTTGTGTCACAGTCAGGGACGATAGGGGAAATGTACAGTGTGAGTAACAGTGATCTTATTAGGTCACTACCAGCGCCTTCTGAAGCTGACAAGCCCATGATTGTGGAGCTTGCTGTTGCAGCAATGGAGGAACTCACCAGATTGGCTCAGGCTGGAGAACCCTTGTGGGTTATCTCTAGTGACCACGAAGTTCTTAATGAAGATGAATACTTAAGGACTTTTCCTAGGGGCATAGGTCCTAAACCCTTGGGATTAAGATCTGAAGCTTCAAGGGAATCCGCCGTCGTTATCATGAACCATATTAACCTTGTTGAGATTCTCATGGACGTGAATCAATGGTCAATGGTGTTTTGCGGCATCGTTTCAAGAGCTATGACGCTTGAAGTCCTGTCTACTGGAGTGGCTGGAAACTATAACGGAGCTTTGCAAGTGATGTCTGCTGAGTTCCAAGTGCCTTCACCACTTGTTCCTACAAGAGAGAATTATTTCGTTAGGTACTGTAAACAGCATCCAGATGGGACATGGGCAGTGGTCGATGTTTCCTTAGACAACCTACGACCAAGTGGTTTATCTAAAAGCCGAAGAAGGCCTTCTGGCTGTCTCATCCAAGAATTGCCAAATGGATACTCTAAGGTTACTTGGATTGAAAATGTAGAAGTGGATGATAGAAATTTGCACAATATATACAGACCCCTAGTGAATTCTGGGCTTGCCTTTGGAGCTAAACGTTGGGTGGCCACACTAGATAGACAATGTGAACGTATTGCTAGTTCTATGGCCTGCAACATACCTGCAGGGGACCTTTGTGTGATAACAAGTTCAGAGGGAAGGAAGAGTATGCTGAAGCTAGCAGAGAGAATGGTGATGAGCTTCTGTGCTGGAGTTGGAGCTTCAACGGCACATGCATGGACGACACTATCAGCGACAGGGAATGATGATGTGAGGGTTATGACCAGAAAGAGTAAGGATGATCCAGGCAGGCCTCCTGGTATTGTTCTCAGTGCTGCTACTTCTTTCTGCCTTCCTGTTCCTCCAAACAGGGTTTTCAATTTCCTCCGTGATGAGAACTCCAGAAGTGAGTGGGATATTTTATCCAATGGAGGTCTAGTCCAAGAAATGGCTCACATAGCAAATGGTCGCGATCCCGGCAATTTTGTCTCTCTACTTCGTGTAAATAGCGCAAATTCAAGCCAAAGCGACATGGTGATACTTCAGGAGAGCTGCACTGACGCAACGGGTTCGTATGTGATATATGCTCCTGTGGATATTGTGGCCATGAACACAGTTCTTGGAGGAGGGGATCCTGACTATGTTGCTCTCTTGCCTTCTGGTTTCGCCATTCTTCCTGATGGCTCCTCGCTGAGCAACAACAATGGAGGAGGAGGGAATATTCTTGATGTTGGATCAGGAGGTTCTCTTCTCACTGTGGCGTTTCAGATCTTAGTTGATTCAGTGCCAACAGCTAAACTCTCTCTGGGCTCAGTCGCCACTGTTAACAGTTTGATTAAGTGCACTGTCGAGAGGATCAAAGCTGCCGTCATCTAA 2214 0.4661 MFQQPNIIDSDMLDMSHKMSSDSDLMGRKTNVVDDDYETKSVTETTMEAPSGDDQDPAYQRPKKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHDNSILKSENEKLRAENDRYKEALSNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTTFSHLSSHHHVPSRSLEDLGVGSNFVSQSGTIGEMYSVSNSDLIRSLPAPSEADKPMIVELAVAAMEELTRLAQAGEPLWVISSDHEVLNEDEYLRTFPRGIGPKPLGLRSEASRESAVVIMNHINLVEILMDVNQWSMVFCGIVSRAMTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHPDGTWAVVDVSLDNLRPSGLSKSRRRPSGCLIQELPNGYSKVTWIENVEVDDRNLHNIYRPLVNSGLAFGAKRWVATLDRQCERIASSMACNIPAGDLCVITSSEGRKSMLKLAERMVMSFCAGVGASTAHAWTTLSATGNDDVRVMTRKSKDDPGRPPGIVLSAATSFCLPVPPNRVFNFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNFVSLLRVNSANSSQSDMVILQESCTDATGSYVIYAPVDIVAMNTVLGGGDPDYVALLPSGFAILPDGSSLSNNNGGGGNILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVI 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0987 737 MobiDBLite consensus disorder prediction 1 72 - -
Lele34g0987 737 Pfam START domain 260 477 IPR002913 GO:0008289
Lele34g0987 737 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 61 736 IPR042160 -
Lele34g0987 737 Gene3D - 51 137 - -
Lele34g0987 737 FunFam Homeobox-leucine zipper protein GLABRA 2 259 476 - -
Lele34g0987 737 SUPERFAMILY Homeodomain-like 47 121 IPR009057 -
Lele34g0987 737 SUPERFAMILY Bet v1-like 498 733 - -
Lele34g0987 737 SMART START_1 259 477 IPR002913 GO:0008289
Lele34g0987 737 FunFam Homeobox-leucine zipper protein HDG1 51 137 - -
Lele34g0987 737 Pfam Homeodomain 64 119 IPR001356 GO:0003677
Lele34g0987 737 ProSiteProfiles START domain profile. 250 480 IPR002913 GO:0008289
Lele34g0987 737 MobiDBLite consensus disorder prediction 15 42 - -
Lele34g0987 737 SUPERFAMILY Bet v1-like 252 479 - -
Lele34g0987 737 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Lele34g0987 737 Coils Coil 120 150 - -
Lele34g0987 737 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Lele34g0987 737 CDD homeodomain 64 122 IPR001356 GO:0003677
Lele34g0987 737 SMART HOX_1 62 125 IPR001356 GO:0003677
Lele34g0987 737 CDD START_ArGLABRA2_like 254 476 - -
Lele34g0987 737 Gene3D - 320 482 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0987 Lele-ChrLele34 19005251 19008977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0987 4 736 Homeobox Transcription Factor Family AT4G04890 78.983 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele34g0987 START 3e-56 CL0209