Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0986 ATGGACCCTCCAAATCTCTTCTCTGCTGCTCCGATCGTCTCTTCAAAATCCAATATCCCCAATGAGATCGCGCAGAAGCCTTGCCCTTCGATTCTAGTGGGCCGGTTCAAGGCTTTGCTAAAGGAACGCAAGGATGAATTCAGGGTTTCCTCCGGTGATGACGTGCCGGTGCCACCCCCTAGCACTGAAGAAATTGTGCAAATTTACCGGTTGTTGTTGACGGACCTCACTTGTAACTTGAAGCCTATCATTACGGATCTTACCATTATTGCTGAGCTTCAGGTAGAGCATGCCAGAGGCATCGCCGATGCAATTTGCACTCGGATTCTTGAGGTGCCTGCAGATCAAAAGCTGCCGTCCCTCTATCTTTTGGACAGCATTGTGAAGAATGTTGGTCAGGGATATATTAGATGCTTCTCTTCTTTGGTTCTATTGTCTCCCCAGATTTTCTGTGAGGCATACAGGCAGGTTCATCCTAAGCTGCATAATGCTATGTGCCATCTCTTTGGCACCTGGTCAACAATCTTTCCACCTTCTGTCCTACGCAAGATTGAAGGTCAACTGCAGTTTTCTCAAGCAATTAATAGTCATTCATCTACCACTGATCCCCTTAGGGTGTCTGAATCTCGTCAAGCAACTCATGGCATACACATCTATCCAAAGTACTTGCAGCAGTTGGAACATTCTACTATGGATAGTGTTGGAGGTGAAAAATTGGAATCAACAGTAAATTTGGGTCTTGTGAATTTTGGCCGTGGAGCTAGGAAGATGCATCAACCTTTATCTAGCAGGCTTGGGAGATCTTCACCTTCAGAAATCGGACTTGATAGGCCGCTGTCAGCAACTATAGATGATTATGCAGTTGACAATTCTGCTTGCTGGATAGCTGAGAGAGATCATCTTTCTAATCCTGCATTTGATTATGGAGTTGGTAAAGCAGGAAGTAGAGGTGAAGAGTTGAGTGGGTGGAAACAAAAACATTTTTCTGATGATGGTCGGAACCAGTTTCAAGTTTCTATGTCGTCTAGTCTTAGTAATGGGCATCAGCGTCAAAATCTTAAAGCTTTAATAGATGCATATGGGAGCGATAAAAATGAAACCTTCAATAATAAGCCTTTGTTGGTTGAACATCAGGACACAAATGGTTTAAACAAGGTTGTGTCATCATCATGGCAAAACACTGAAGAGGAGGAATTTGATTGGGAAGATATGAGTCTAACGTTAGTAGACCATGGTAGGAACAATGATTTCTTACCATCAAGTATTGGTTTCTCCAGGGAAAAGCCTGTTATTAGTGAAGCTACTTCAGAGTGGGATCCTAGGCGTAGTTGGTCTAGTCGGTTGCAGCTACCACCAATGGACGATTCCTCTGTTATAGCAGGAGATAAATTTTATGCTCGCGGATCACCAGTTCAGGCATCTGGATACCAAAACCAGACAAACCGAAGTTTAAGCTCCCGTCCACCTCTTGATGCTTGGAATATTAGAGGTCGAGCAAGCAATATTCAGATATCCCCTGACAGTAACATCCCAAATAGTGACATAAACCTATATGGGACTCAGTCATCTTTGTCCAGAATGGGTTCCACACTTGAGTCCAATGTGGAGATTTGTCCAACAGTTTTACCAGCTTCTCTAGGAATGAGGCTGCCAGTTAAATCTCATGCTGTTTGCCCCCCAACCTTAAACCATACATTTCCTTTGGATAAACATGTTGAGAGTCAGTTTGAGCCAATACATGCTAGCAGCACCATTGTAAATAATGGTCAAAACAATTCTTCATTTTTAGATGGTGTTGAGAACAAGGTTACAGGTTTATCAAAGCTGCATCAGCTGCCAACCCAGCTAGCTGGGCAGATTTCGTTTAACCATAAAAACCGTGGACAAGCACAACAAATAGGTTTTCCATCTCAGGATGTGCAAGAGAAGTTACTTAGATCACAAGCTCCAGCAGCTCTGCAATTTAGTCATGGAAGCTCTTTGCTAGGACCCATGCCAAATTTGCTTCCTGCTGTACAATTCCCTATTACAGTCCAGAGCATTGCAAATAACTCTTCTCAATTACAGGGGGGAAACTTGATGTCTTTACTTCCAGTCTCCCATCCTGGTATGTCACTAACAATACCTTATTCAAATGCTGGTCCTATTGTGTCAACTCAACAGCCAGGTGGTGCATTTTCTGGTTTAATTAACTCGCTTATGGCCCAAGGTTTGCTATCAATGACTAATCAACCTCCCGAACAGGATTCTGTTGGAACTGAGTTTAATCCAGACGTTCTAAAGATTCGTCATGAGTCTGCAATCAGTGCCTTATATGGCGATCTTCCTAGACAATGCACTACTTGTGGCCTTCGATTCAAGTTCCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTTACTAAGAACCGGATGTCTAAAAATCATAAGCAGAAGCCCTCTCGCAAGTGGTTTGTGAGTGAGAGTATGTGGCTTAGTGGCGCAGAGGCATTGGGCACAGAATCAGTCCCTGGCTTTTTGCCAAGTGAGATTTTAGAGGGGAAAAAAGATGATGAAGAGTTGGCTGTGCCAGCTGATGAGGATCAGAATACATGTGCATTATGTGGTGAGCCTTTTGATGAGTTTTACAGTGATGAAGCTGAGGAATGGATGTACATAGGAGCTGTATATATCAATGCACCCAAGGGAACAGTAGCAGGCATGGATAGGTCTCAGTTAGGCCCCATTGTTCATGCGAAGTGCAGATCTGAGTCTAGTGCTGTTCCGTCTGAAGATAATGGACTGGATGAAAGGGGCACCGATGAGGAGGAAAGTCGACGAAAACGAATGCGGAGTTAA 2838 0.4376 MDPPNLFSAAPIVSSKSNIPNEIAQKPCPSILVGRFKALLKERKDEFRVSSGDDVPVPPPSTEEIVQIYRLLLTDLTCNLKPIITDLTIIAELQVEHARGIADAICTRILEVPADQKLPSLYLLDSIVKNVGQGYIRCFSSLVLLSPQIFCEAYRQVHPKLHNAMCHLFGTWSTIFPPSVLRKIEGQLQFSQAINSHSSTTDPLRVSESRQATHGIHIYPKYLQQLEHSTMDSVGGEKLESTVNLGLVNFGRGARKMHQPLSSRLGRSSPSEIGLDRPLSATIDDYAVDNSACWIAERDHLSNPAFDYGVGKAGSRGEELSGWKQKHFSDDGRNQFQVSMSSSLSNGHQRQNLKALIDAYGSDKNETFNNKPLLVEHQDTNGLNKVVSSSWQNTEEEEFDWEDMSLTLVDHGRNNDFLPSSIGFSREKPVISEATSEWDPRRSWSSRLQLPPMDDSSVIAGDKFYARGSPVQASGYQNQTNRSLSSRPPLDAWNIRGRASNIQISPDSNIPNSDINLYGTQSSLSRMGSTLESNVEICPTVLPASLGMRLPVKSHAVCPPTLNHTFPLDKHVESQFEPIHASSTIVNNGQNNSSFLDGVENKVTGLSKLHQLPTQLAGQISFNHKNRGQAQQIGFPSQDVQEKLLRSQAPAALQFSHGSSLLGPMPNLLPAVQFPITVQSIANNSSQLQGGNLMSLLPVSHPGMSLTIPYSNAGPIVSTQQPGGAFSGLINSLMAQGLLSMTNQPPEQDSVGTEFNPDVLKIRHESAISALYGDLPRQCTTCGLRFKFQEEHSSHMDWHVTKNRMSKNHKQKPSRKWFVSESMWLSGAEALGTESVPGFLPSEILEGKKDDEELAVPADEDQNTCALCGEPFDEFYSDEAEEWMYIGAVYINAPKGTVAGMDRSQLGPIVHAKCRSESSAVPSEDNGLDERGTDEEESRRKRMRS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0986 945 Pfam CID domain 83 183 IPR006569 -
Lele34g0986 945 FunFam polyadenylation and cleavage factor homolog 4 58 189 - -
Lele34g0986 945 ProSitePatterns Zinc finger C2H2 type domain signature. 779 799 IPR013087 -
Lele34g0986 945 SMART 558neu5 64 189 IPR006569 -
Lele34g0986 945 Gene3D - 59 190 IPR008942 -
Lele34g0986 945 ProSiteProfiles CID domain profile. 61 192 IPR006569 -
Lele34g0986 945 MobiDBLite consensus disorder prediction 914 945 - -
Lele34g0986 945 CDD CID_Pcf11 69 189 - -
Lele34g0986 945 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 59 931 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Lele34g0986 945 SUPERFAMILY ENTH/VHS domain 60 190 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0986 Lele-ChrLele34 18993274 18999711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0986 717 945 C2H2 Transcription Factor Family AT4G04885 72.489 1.59e-107 350