Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0978 ATGGATTGTTTCCCATGCTGCAATAAGCAAGAAGTTGAAACGGACCCTTTGAGCAAAAGTAACAAGGATTATGCACAATCCAGGAAATCCACATTCAAATCTTTTTTGGGGGCTCTCTCTACCAAAACAGGTAGCAGCAGACAAAGACACATTACAGCTGAGATACGAAAATATGGAACGGCGAAGAACAATACCCGAGTCTTTACAGTTCAAGAACTCGCCTCTGCAACTGACAACTTCAGTAATGACTGTTTGATCGGTGAAGGTGGTTTTGGCAGTGTCTACAAAGGATACATACAAAGCCTTAATCAAGTCTCTCTCTCTCTCTCTCAAACATATATATATGGTCTGACAAGTAATAACGTTGTACAGTGGGTTTACGTGAATGTTGTATATATCTTGGAATGTTTGCAGGCTGTGGCTGTGAAGAGACTGGACAGGAATAAAATGCAAGGAAGTAGAGAATTCTTTTCAGAAGTTGTAACGTTGAGTTTGGTGAATCACCCCAACCTAGTCAAGCTCATAGGTTATTGTATTCAAGGAGATCAAAGGATGTTAGTTTATGAATTGATGGTCAATGGCAGCCTTGAAAGTCACCTTCTAGATTTAGGGCCAGACAAGGAGGGACTGGATTGGGCAACGAGGATGGAAATAGCAGAAGGAGCAGCGAGAGGAATGGAGTATCTGCATGAAGAAGCAGATCCACCGATAATATACAGAGACTTGAAGGCATCGAACATACTCTTAGATGAGAACTTCAATGCGAAGCTCTCAGATTTTGGCCTGGCGAAGATGGGACCAACGACAGAAGAAGGAAAAGATCATGTGTCGACGAGGGTGATGGGAACGTTCGGGTACTGTGCGCCCGAGTATGCTTTGACGGGTCGGGTCACTACAAAGTCTGATATTTATAGCTTCGGAGTTGTGTTAATGGAGATCATCACAGGAAGAAGAGTCTATGATACTGCTAGAGCAGAAGAAGAGCAAAACCTTATCGACTGGGCACAACCAATGCTAGAGGACAGAGAGAAGTTCACACTAATGGCAGATCCATTACTGAAGGATAACTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCAGACACAAGACCGTTGATGAGTGATGTAGTAACAGCGCTTCAGCACATAACACAACCACCAGTAAACGGTGAAGAAGAAGATGAAAATAATAAGAACAACAAAGGACAATCTATAAAATTTGCAGGGCATGTTGAATCATTTAGGGTTGGAAGCTCACGTGTAGACAACAATCTACAAAATCAAATAAGGATTGGAAGTTCAAGTGTAAGCCGTCTACATCACAGAGCTGGCAGTTCAAGTGTTGGAGGCCATCAACAACATCACAGACTTGGAAGTTCAAGTGTTGGTCATCAACAACATCACAGGGCTGGAAGTTCAAGTGTTGGAGGTCATCAACAACATCATAGGGCTGGAAGTTCAAGTGTTGGCCAATAA 1506 0.4309 MDCFPCCNKQEVETDPLSKSNKDYAQSRKSTFKSFLGALSTKTGSSRQRHITAEIRKYGTAKNNTRVFTVQELASATDNFSNDCLIGEGGFGSVYKGYIQSLNQVSLSLSQTYIYGLTSNNVVQWVYVNVVYILECLQAVAVKRLDRNKMQGSREFFSEVVTLSLVNHPNLVKLIGYCIQGDQRMLVYELMVNGSLESHLLDLGPDKEGLDWATRMEIAEGAARGMEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKMGPTTEEGKDHVSTRVMGTFGYCAPEYALTGRVTTKSDIYSFGVVLMEIITGRRVYDTARAEEEQNLIDWAQPMLEDREKFTLMADPLLKDNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHITQPPVNGEEEDENNKNNKGQSIKFAGHVESFRVGSSRVDNNLQNQIRIGSSSVSRLHHRAGSSSVGGHQQHHRLGSSSVGHQQHHRAGSSSVGGHQQHHRAGSSSVGQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0978 501 PANTHER OS07G0668900 PROTEIN 3 401 - -
Lele34g0978 501 Pfam Protein tyrosine and serine/threonine kinase 139 334 IPR001245 GO:0004672|GO:0006468
Lele34g0978 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele34g0978 501 SUPERFAMILY Protein kinase-like (PK-like) 62 392 IPR011009 -
Lele34g0978 501 SMART serkin_6 80 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0978 501 Gene3D Phosphorylase Kinase; domain 1 126 191 - -
Lele34g0978 501 Gene3D Transferase(Phosphotransferase) domain 1 192 418 - -
Lele34g0978 501 CDD STKc_IRAK 86 393 - -
Lele34g0978 501 Gene3D Phosphorylase Kinase; domain 1 55 112 - -
Lele34g0978 501 FunFam Serine/threonine-protein kinase PBS1 191 410 - -
Lele34g0978 501 ProSiteProfiles Protein kinase domain profile. 80 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0978 501 MobiDBLite consensus disorder prediction 442 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0978 Lele-ChrLele34 18921093 18923888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0978 1 397 Glycoside Hydrolase AT3G07070 50.995 4.79e-133 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele34g0978 PK_Tyr_Ser-Thr 2.6e-41 CL0016