Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0952 ATGTATAGTGCGTGGCGTATAAGACCTCATTATCTTCCTTGCCGCAAGAAAGCTAGAAAGCTAGCAATGGAGTCCCAGAAGAATATGCCTGAGAATTCTGTTTCTTCCTCTTCTCCTCCTTCTCCTCTTAGCAGTGTCATTAACACTGATCACAGCACTTCAGAACCATCTCTGGCGAGACTTGGTCACTGGGGTCCCAATGCTGTGTCATCATCAGGGATTCGGCCGTATGTCCGATCCAGGTCGCGTCGCCTTCGTTGGACGCCGGAACTCCATGAATGTTTTGTGCATGCAGTTAAGAGGCTTGGTGGAGAACACAGGGCAACGCCAAAGTTGATTTGGCAGCTGATGAATGTGAAGGAATTGGCTATGTCTCATGTTAAGAGCCACCTTCAGATGTACAGGAGCATGAGGCATGAGATTGAAGGAAGAAGTGAAACATATGAAACTGAATTTCAGTTTGGGTTTGACAATGCCAGGAATCGTGGGACAGTGTCGCCCATTCCCAAGAAGAGCCACTGCTACATCATCTTCAACGATCTCTTTAAGACATTTCATGATGATGATGCCCAAGAGATGACTGATGCCGCAGGTGATCAGAGCCAAGTTGAAAGATTTGAAGATTTTGGGAATCAGAAGCCTTCCTATGGATTTGGCCAAGACAAGACCTTCTTTCCCCACTTTTCCGGCTACGTTGGTGGTGGATTTGGTTTTGGAGGCGGATTTGGATCCAGAAATGGTGGATATGGTGGTGGTTGGGGTGGAGGTGGAGGTGGCGGGGCAGGTGGTGGATATGGCGGAGGGTTTATCAAGGGGCAACAACCTTAA 828 0.4819 MYSAWRIRPHYLPCRKKARKLAMESQKNMPENSVSSSSPPSPLSSVINTDHSTSEPSLARLGHWGPNAVSSSGIRPYVRSRSRRLRWTPELHECFVHAVKRLGGEHRATPKLIWQLMNVKELAMSHVKSHLQMYRSMRHEIEGRSETYETEFQFGFDNARNRGTVSPIPKKSHCYIIFNDLFKTFHDDDAQEMTDAAGDQSQVERFEDFGNQKPSYGFGQDKTFFPHFSGYVGGGFGFGGGFGSRNGGYGGGWGGGGGGGAGGGYGGGFIKGQQP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0952 275 Gene3D - 82 140 - -
Lele34g0952 275 MobiDBLite consensus disorder prediction 19 64 - -
Lele34g0952 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 139 IPR017930 -
Lele34g0952 275 SUPERFAMILY Homeodomain-like 80 137 IPR009057 -
Lele34g0952 275 FunFam Two-component response regulator 79 142 - -
Lele34g0952 275 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 83 136 IPR006447 GO:0003677
Lele34g0952 275 Pfam Myb-like DNA-binding domain 85 135 IPR001005 -
Lele34g0952 275 MobiDBLite consensus disorder prediction 26 56 - -
Lele34g0952 275 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 48 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0952 Lele-ChrLele34 18749304 18754506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0952 73 144 G2-like Transcription Factor Family AT1G14600 63.889 9.83e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele34g0952 Myb_DNA-binding 9e-06 CL0123