Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0947 ATGGAGTGGACTAGGGGGCACACCATCGGCCGGGGTTCCACCGCCACTGTGTCGGTCGCAGAGTTTCGTGGGTCTGGTCGGATGTTCGCGGTGAAGTCGGTGGAGCTTCAACGGTCGGAATTCCTCAGGAGAGAACAGAGTATTCTCTCTACATTAGCGTGTCCCCATGTTGTAGCATACGAAGGTTGTGATACCACATTTGAAAATGGTGCGTTCATGTATAACTTGTTCATGGAGTATGCGCCTTACGGGTCAATCGCCGACGAAATTCGCGAGCGTGACGGTGGGTTGGATGAGCTTGTGGTTGGACGTTATGCTCGTCAGATTCTGCTTGGGTTGAGCTACTTGCATTCCAATGGGATTGTGCATTGTGATTTGAAAGGCCAGAATGTTTTGCTCACCGATGAAGGGGCTAAAATTGCTGACTTGGGTTGTGCCCGGAGAGTTGCGGTGGCGCAGGATTATGGTGGTGGGGTGATTGCCGGCACCCCAGCGTTCATGGCACCGGAGGTGGCGCGTGGGGAGCAGCAGGGGTTCCCCGCCGACGTGTGGGCTCTTGGTTGTACTGTGCTGGAGATGATCACGGGAAAAGCACCGTGGCATGACATTTCCAACCCGGTTAGTGTCCTCTATCGAGTCGGGTTCTCCGGGGAGGTGCCGGAGATTCCGAATTTCTTGTCGGAGCAAGGGAAGGATTTTGTCACCATGTGCTTGAAAACAGATCCGAATGACAGGTGGTCAGCAGATGAGCTTCTTAAGCATGAGTTCGTTCAGGATTCGAGCACTGTCTCGAAGAAATTTGATGATTCTAGTTCAAATTCTCCAACTAGTGTGTTGTTGGATCGAGGTTTCTGGGACACGTTTGACGAGTTGCAGAAAACCCAAACACAGGATCGGAACCCGAACCCGACCTATGGTCATGTCTGTCCTTGGGATCCTCCTAGCCCCAGAAGTAGAATTCGTAGGTTGTCTTCCTCTATACCCAATTGGGAATGTGATGACAAATGGATCACAGTAATAGACAGCAGCATCAGAGAGTTTTATGGCGGAGAATCTAATGAAGAAACAGAGAATTATGGATTAGACAGTTCAAATTACATTAGAGAGGACAATTATTTGGTTGTTACTTCTTGTGAAGCTAGAACAGTAATTAGTATAGTTGGATTAAGCGAGTGTTGTAATATTAACTATGATTGTTGTTGCATCAGAGAATCTTTATTCGGATGTTCAAGATGCATAAAAATGGTTCCCAATAGAAATATTTTTCATGACTCGCTTTCAGCTTTCCCTCTCTAA 1296 0.4799 MEWTRGHTIGRGSTATVSVAEFRGSGRMFAVKSVELQRSEFLRREQSILSTLACPHVVAYEGCDTTFENGAFMYNLFMEYAPYGSIADEIRERDGGLDELVVGRYARQILLGLSYLHSNGIVHCDLKGQNVLLTDEGAKIADLGCARRVAVAQDYGGGVIAGTPAFMAPEVARGEQQGFPADVWALGCTVLEMITGKAPWHDISNPVSVLYRVGFSGEVPEIPNFLSEQGKDFVTMCLKTDPNDRWSADELLKHEFVQDSSTVSKKFDDSSSNSPTSVLLDRGFWDTFDELQKTQTQDRNPNPTYGHVCPWDPPSPRSRIRRLSSSIPNWECDDKWITVIDSSIREFYGGESNEETENYGLDSSNYIREDNYLVVTSCEARTVISIVGLSECCNINYDCCCIRESLFGCSRCIKMVPNRNIFHDSLSAFPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0947 431 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lele34g0947 431 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0947 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele34g0947 431 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0947 431 SUPERFAMILY Protein kinase-like (PK-like) 3 293 IPR011009 -
Lele34g0947 431 Gene3D Transferase(Phosphotransferase) domain 1 2 302 - -
Lele34g0947 431 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele34g0947 431 CDD STKc_MAPKKK 2 257 - -
Lele34g0947 431 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0947 Lele-ChrLele34 18725756 18727051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0947 3 339 MAP Kinase Kinase Kinase AT5G55090 48.105 5.47e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele34g0947 Pkinase 1.8e-52 CL0016