Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele34g0945 ATGGACAAATCATGGGGTCTCGCTCTTGAATCTACTCCTGCACACACCATGCTTCCCTCCTTAGGCTTCCCCGTCAACCTCACTCGCCCCTCCGCCGACTCCCGCCTCCCCCTCGGCGAGCTCGACTTCTTCTCCGATCGCAACACCCCTACCCCTCTTAAACCCGTCAAGAAGGAGGACAATCCTCCCCCCCAATCGCCCCCTTTCCGTGTTCATACTGGCCTGCAACTCCTTACTGCTCATGCCGGGAGCGATCAGTCTACGGTGGACGACGGAGTTTCATCGGATGTTGAAATCAAGCGAGCCAAGAGTTCCACTGAGTTGGCGCAACTAAAAGAGGAGCTTCAGCGTATGAATGCGGAAAACCTGAAGCTAAGGGACATGTTGAGCCACGTGAGCAGTAATTACTCGGCTCTGCAAATGCATCTCGTCACATTAATGCAACAGCAGCAGCAACAGATTCAACAACGTACCCAGAGCACAGCAAATGAGGTTGTTCGATCAAAACCTGATGACAAGAGAGAAATTGTACCCATGCCGCTTCTGGAATTGGGGCCTAGTAATGGGGCAGCTGAAGTAGATAACGAGGTCTCCAATTCAACTTCAGATGAAAGAACACGATCCACCACTCCTCTTAACAACAACAATGGTAAAAATGAAAGAGAAGAGAGTCCAGATAACTCGGATGCTCAGCCCCAAGGCTGGGGCACTGGTCCTAACAAGCTTCAGAAGCTGAACCCCTCACCAAACTCCGCCGACCCATCAACCAGCACCACCGCCACCGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCAGAAGCACCCATGATCAGTGACGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGTGCTTACTATAGATGCACCATGGCGGTCGGTTGCCCAGTTCGCAAACAAGTACAACGTTGTGCGGAGGACAGGACGATTTTGATAACCACCTATGAAGGAAGCCATAACCATCCGTTGCCACCGGCGGCGATGGCGATGGCATCTACGACGACGGCGGCTGCTAGCATGTTGCTGTCGGGTTCAATGTCGAGTGCAGACGGAATAATGAATCCGAATTTGCTGGCCAGAGCTATTCTTCCTTGTTCGTCGACAAGCATGGCTACGCTTTCGGCTTCGGCTCCTTTTCCTACCATAACATTGGACCTCACTCACAATTCAAATAGTAGTAACATGAACAACCCTATGCAGTTCCAGAGACCCCCATTCCAGGTACCTAATTTCCAAGGGCAGCCTCAAGTTCAACAACCAACCGCGTCGGGTCAGCACCAGTTGACTCAGGCATTTTCACAAGCACTTTACAATCAATCCAAGTTCTCTGGCCTTCACTTGTCTCAGGATATGGGTTCGTCGTCTTCATCTTCTTCCCAATTAGCCCACCAGCAACCTCCCAGGCCGGTGCAGCCAGGCCAACCGCCGCAGCCGTCGTTGGCAGACACCGTCAGCGAGGCCACCGCGGCCATCACCGCCGACCCAAACTTCACAGCGGCGCTTGCGGCCGCCATCTCCTCCATCATTAATGGCGGCGGTGTTCCCCCGAGCAGCAACAACAACAGCAGTAGCAGCGGCAATCCCAACATCACCAGTGGCACCAAAATCAGCAGTTTCTCAGGGAATCACTAA 1689 0.5305 MDKSWGLALESTPAHTMLPSLGFPVNLTRPSADSRLPLGELDFFSDRNTPTPLKPVKKEDNPPPQSPPFRVHTGLQLLTAHAGSDQSTVDDGVSSDVEIKRAKSSTELAQLKEELQRMNAENLKLRDMLSHVSSNYSALQMHLVTLMQQQQQQIQQRTQSTANEVVRSKPDDKREIVPMPLLELGPSNGAAEVDNEVSNSTSDERTRSTTPLNNNNGKNEREESPDNSDAQPQGWGTGPNKLQKLNPSPNSADPSTSTTATAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSSTSMATLSASAPFPTITLDLTHNSNSSNMNNPMQFQRPPFQVPNFQGQPQVQQPTASGQHQLTQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLAHQQPPRPVQPGQPPQPSLADTVSEATAAITADPNFTAALAAAISSIINGGGVPPSSNNNSSSSGNPNITSGTKISSFSGNH 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele34g0945 562 MobiDBLite consensus disorder prediction 407 446 - -
Lele34g0945 562 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 86 544 IPR044810 GO:0003700
Lele34g0945 562 MobiDBLite consensus disorder prediction 528 562 - -
Lele34g0945 562 Coils Coil 101 128 - -
Lele34g0945 562 Gene3D WRKY domain 267 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele34g0945 562 FunFam probable WRKY transcription factor 31 267 344 - -
Lele34g0945 562 MobiDBLite consensus disorder prediction 192 218 - -
Lele34g0945 562 Pfam WRKY DNA -binding domain 284 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele34g0945 562 ProSiteProfiles WRKY domain profile. 277 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele34g0945 562 MobiDBLite consensus disorder prediction 38 69 - -
Lele34g0945 562 MobiDBLite consensus disorder prediction 530 562 - -
Lele34g0945 562 SUPERFAMILY WRKY DNA-binding domain 275 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele34g0945 562 MobiDBLite consensus disorder prediction 465 486 - -
Lele34g0945 562 MobiDBLite consensus disorder prediction 228 265 - -
Lele34g0945 562 MobiDBLite consensus disorder prediction 154 276 - -
Lele34g0945 562 MobiDBLite consensus disorder prediction 465 504 - -
Lele34g0945 562 SMART WRKY_cls 282 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele34g0945 Lele-ChrLele34 18707358 18709618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele34g0945 33 540 WRKY Transcription Factor Family AT1G62300 52.642 1.38e-144 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele34g0945 WRKY 5.8e-24 CL0274